Query= MSMg01no280_g22.b1 MSMg01no280_g22.b1 CHROMAT_FILE:
MSMg01no280_g22.b1 PHD_FILE: MSMg01no280_g22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:16 2005
(323 letters)
>mm_chr11_25139008_25139730
Length = 723
Score = 555 bits (287), Expect = e-162
Identities = 311/319 (97%)
Strand = Plus / Minus
Query: 5 gaattccaacactgtctctataatttttaaatgagatatgtagaacctagctgaaaattg 64
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 gaattccaacactgactgtataatttttaaatgagatatgtagaacctagctgaaaattg 464
Query: 65 agacagaagcatcttgggtgggagcagatgctataatgtagggttgagtttagaaaacac 124
||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 463 agacagaagcagcttgggtgggagcagatgctataatgtaaggatgagtttagaaaacac 404
Query: 125 acagcacgggatttattaacaataaaaggacaaaacaaggaagcaattggctcccctgtt 184
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 403 acagcacgggatttattaacagtaaaaggacaaaacaaggaagcaattggctcccctatt 344
Query: 185 atcatgtgagccttgcagcccaaagtgacacatgctgttgattatatttatatctccata 244
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 accatgtgagccttgcagcccaaagtgacacatgctgttgattatatttatatctccata 284
Query: 245 aatggtggagtggacacaaagccaatgttcaacagaagaagaatggacagataaaatagt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 aatggtggagtggacacaaagccaatgttcaacagaagaagaatggacagataaaatagt 224
Query: 305 gttaaaatagggttaaaac 323
|||||||||||||||||||
Sbjct: 223 gttaaaatagggttaaaac 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no280_g22.g1 MSMg01no280_g22.g1 CHROMAT_FILE:
MSMg01no280_g22.g1 PHD_FILE: MSMg01no280_g22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:16 2005
(335 letters)
>mm_chr11_25013589_25014323
Length = 735
Score = 567 bits (293), Expect = e-166
Identities = 322/337 (95%), Gaps = 11/337 (3%)
Strand = Plus / Plus
Query: 1 aacctaattaaacaaaaactaaaaaaaaaaaaaaaaa---ttcttcaggccaacataaga 57
||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 198 aacctaattaaacaaaaactaaaaaaaaaaaaaaaaaaaattcttcaggccaccataaga 257
Query: 58 aaagaatttctgaagtaatttctttgggaagtttttattttttctctctctcttcttgtt 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 aaagaatttctgaagtaatttctttgggaagtttttattttttctctctctcttcttgtt 317
Query: 118 aattcacttttttctattgtaggtttcttaaaggagaaaataaagttgcctattataaaa 177
|||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 318 aattcacttttttctattgtagttttcttaaaggagaaaataaagttacctattataaaa 377
Query: 178 agtggggcaaaaaatgattccaagtctataaggtaaagttgaatctttacaatgctctga 237
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 agtggggcgaaaaatgattccaagtctataaggtaaagttgaatctttacaatgctctga 437
Query: 238 actgtgatgaaatacatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagcgtg 297
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 438 actgtgatgaaatacatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg--cgtg 495
Query: 298 tgcatgtgtgcgtgtgcatgtgtgcatgtatgtcaaa 334
||||||||||| ||||||||||||||||||||
Sbjct: 496 tgcatgtgtgc------atgtgtgcatgtatgtcaaa 526
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 735
Length adjustment: 9
Effective length of query: 326
Effective length of database: 726
Effective search space: 236676
Effective search space used: 236676
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
