Query= MSMg01no288_f06.b1 MSMg01no288_f06.b1 CHROMAT_FILE:
MSMg01no288_f06.b1 PHD_FILE: MSMg01no288_f06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:23 2005
(658 letters)
>mm_chr11_3694802_3695858
Length = 1057
Score = 1243 bits (643), Expect = 0.0
Identities = 652/655 (99%), Gaps = 1/655 (0%)
Strand = Plus / Plus
Query: 4 ggaattcactctgtagaccaggctggcctcgaactcagaaatccgcctgcctctgcctcc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcactctgtagaccaggctggcctcgaactcagaaatccgcctgcctctgcctcc 263
Query: 64 caagtgctgggattaaaggcatgaaccaccacgcccagctcggtaattaaattgaatcta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 caagtgctgggattaaaggcatgaaccaccacgcccagctcggtaattaaattgaatcta 323
Query: 124 tagcttgcctttgataaatagccatttgtgcagcattaagcctgcccactcatcgacatg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tagcttgcctttgataaatagccatttgtgcagcattaagcctgcccactcatcgacatg 383
Query: 184 gaatagtcttccatgttctagtgtcttctttgatttcttcaatgttttaaagttttcact 243
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 384 gaatagtcttccatgttctagtgtcttctttaatttcttcaatgttttaaagttttcact 443
Query: 244 gaagtggtctttcaccccaactctcacaccttgtttaagttcattactggtattttttaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gaagtggtctttcaccccaactctcacaccttgtttaagttcattactggtattttttaa 503
Query: 304 aaagccatcgtcaatgagatctttcccttcaattctttctcagtaaattcactttaaaaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaagccatcgtcaatgagatctttcccttcaattctttctcagtaaattcactttaaaaa 563
Query: 364 aagttatttttttttatgtgtgcatcttgtcttcatatgtctgtgtaccacatgcattca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aagttatttttttttatgtgtgcatcttgtcttcatatgtctgtgtaccacatgcattca 623
Query: 424 gtatccacagatgccagaaaagggtgttggagcatctgaaactgatttacagatgattgt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gtatccacagatgccagaaaagggtgttggagcatctgaaactgatttacagatgattgt 683
Query: 484 aaactgccatgtgggtgctgggaattgaacccgggtcctatggaagaatagccagcactc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aaactgccatgtgggtgctgggaattgaacccgggtcctatggaagaatagccagcactc 743
Query: 544 ttaactgtaactgtaattttttcaaaacctattttttttttctgagatgcacaggacaca 603
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 744 ttaactgtaactgtaattttttcaaaacctattttttttt-ctgagatgcacaggacaca 802
Query: 604 gtcttttgtgtatcaccacgggtctggaacatgggatcccaccaagcttggcttc 658
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 803 gtcttttgtgtatcaccatgggtctggaacatgggatcccaccaagcttggcttc 857
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1057
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1047
Effective search space: 678456
Effective search space used: 678456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no288_f06.g1 MSMg01no288_f06.g1 CHROMAT_FILE:
MSMg01no288_f06.g1 PHD_FILE: MSMg01no288_f06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:23 2005
(294 letters)
>mm_chr11_3862451_3863144
Length = 694
Score = 569 bits (294), Expect = e-167
Identities = 294/294 (100%)
Strand = Plus / Minus
Query: 1 ctgacatgcaagcataaggatatggagttcagatctgcaacacacacataaaagttgtgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ctgacatgcaagcataaggatatggagttcagatctgcaacacacacataaaagttgtgc 488
Query: 61 gcacatttaaaacatatcattccatctataaagataatttttaaacttatgagatctgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gcacatttaaaacatatcattccatctataaagataatttttaaacttatgagatctgat 428
Query: 121 gataggtttaagtcagtcttaaaggtggtaatttcatgtttataaaaaagttaaaattta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gataggtttaagtcagtcttaaaggtggtaatttcatgtttataaaaaagttaaaattta 368
Query: 181 tgacttttttatcaatttcctttaaattttattacttttacttcaaaatgttaaaaaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tgacttttttatcaatttcctttaaattttattacttttacttcaaaatgttaaaaaaat 308
Query: 241 tcttggttttctgcttaaagtcatgtatagctgaaatgtaactttgaaagatga 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 tcttggttttctgcttaaagtcatgtatagctgaaatgtaactttgaaagatga 254
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
