Query= MSMg01no288_m09.b1 MSMg01no288_m09.b1 CHROMAT_FILE:
MSMg01no288_m09.b1 PHD_FILE: MSMg01no288_m09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:55 2005
(678 letters)
>mm_chr11_25335803_25336880
Length = 1078
Score = 1266 bits (655), Expect = 0.0
Identities = 670/675 (99%)
Strand = Plus / Plus
Query: 4 ggaattcatagtagcccccagaagagcccatagtctgtttctctgactgttgtgaacaga 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcatagtagcctccagaagagcccatagtctgtttctctgactgttgtgaacaga 263
Query: 64 gaaacccatcatgaaagatgatagtctcgttctacccctcaacctaacatttactgtatc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gaaacccatcatgaaagatgatagtctcgttctacccctcaacctaacatttactgtatc 323
Query: 124 cctagccattatcaaaccagacagaggcaaaggacataagcctacctccaggtctcacgg 183
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 324 cctagccattatcaaaccagacagaggcaaaggacatgagcctacctccaggtctcacgg 383
Query: 184 ggtctgtgagtagggcagtctaatgtctctgtcttccatagcttaaaaaacacatgccag 243
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 384 ggtctgtgagtagggcagtctaatgtctctgtcttccatagcttaaaaaccacatgccag 443
Query: 244 aagaagagccttgaagggaatgtggagacagagagtgctcaacaggccactgctatacct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aagaagagccttgaagggaatgtggagacagagagtgctcaacaggccactgctatacct 503
Query: 304 ggtacactgttgcataagaaggataaggaagatgaaggattctgttctgaacatttcttt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ggtacactgttgcataagaaggataaggaagatgaaggattctgttctgaacatttcttt 563
Query: 364 gagaacatttgcgagttatggagagaagaatttatgaaatgatcttgcataagagaaatg 423
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gagaacatttgtgagttatggagagaagaatttatgaaatgatcttgcataagagaaatg 623
Query: 424 aagtaaaaaaggtgactttccaaagaccatcccttcaattaattcattcaaattttcatt 483
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 624 aagtaaaaaaggtgactttccaaagaccatcccttcaattaattcatacaaattttcatt 683
Query: 484 agaaagtcactgagtccacttaactactctcttgtaactgcaaaccccatgtgagggcaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 agaaagtcactgagtccacttaactactctcttgtaactgcaaaccccatgtgagggcaa 743
Query: 544 gactcagttgtcttcatatttggtgtagtttattgtactggaattaggaagtaaaacact 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gactcagttgtcttcatatttggtgtagtttattgtactggaattaggaagtaaaacact 803
Query: 604 taccttttcttaatcagtaccaaatctggatctactctggagataaatgttatcttttta 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 taccttttcttaatcagtaccaaatctggatctactctggagataaatgttatcttttta 863
Query: 664 taaaagatggatgtg 678
|||||||||||||||
Sbjct: 864 taaaagatggatgtg 878
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 678
Length of database: 1078
Length adjustment: 10
Effective length of query: 668
Effective length of database: 1068
Effective search space: 713424
Effective search space used: 713424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no288_m09.g1 MSMg01no288_m09.g1 CHROMAT_FILE:
MSMg01no288_m09.g1 PHD_FILE: MSMg01no288_m09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:56 2005
(651 letters)
>mm_chr11_25371289_25372338
Length = 1050
Score = 1189 bits (615), Expect = 0.0
Identities = 642/651 (98%), Gaps = 1/651 (0%)
Strand = Plus / Minus
Query: 1 aataaaaattcgaaacaatgagctgactcactcaaatctttgaacagcacacttatttct 60
|||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 850 aataaaaatttgaaacaatgaactgactcactcaaatctttgaacagca-acttatttct 792
Query: 61 ctctctctctgtatatgtgtgtatacatatgtatattatattcaatatatgtttaatgat 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 791 ctctctctctgtatatgtgtgtatacatatgtatattatattcaatacatgtttaatgat 732
Query: 121 tatagttcattgaataaaacagtactgaagaggggtgggcacatttgctagataatcctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 tatagttcattgaataaaacagtactgaagaggggtgggcacatttgctagataatcctg 672
Query: 181 tcagaccaggaaatgacagagaggagaaaagaaaaagatagttatttgtggtagagtgca 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 tcagaccagggaatgacagagaggagaaaagaaaaagatagttatttgtggtagagtgca 612
Query: 241 tttctgcattgtaagactttaagcagaactgatattgccctgagaaaatttattgataca 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 611 tttctgcattgtaagactttaagcagaactgatattgccctgagaaaaaagattgataca 552
Query: 301 gataaataaaacaagaacttctctttattcacacaatttagtttggaataaatgggaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gataaataaaacaagaacttctctttattcacacaatttagtttggaataaatgggaaga 492
Query: 361 acttttaaattatgaattctgcagcaaccaaacttacggaagcagtttcttaaagcccca 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gcttttaaattatgaattctgcagcaaccaaacttacggaagcagtttcttaaagcccca 432
Query: 421 gagaaattactgtggttttcatcttaaggtcgacattggctttcaatagcagtcagagag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gagaaattactgtggttttcatcttaaggtcgacattggctttcaatagcagtcagagag 372
Query: 481 agcttgaagattcctctcagttcttgcatttgttccctctagccatccagtgttggaaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 agcttgaagattcctctcagttcttgcatttgttccctctagccatccagtgttggaaac 312
Query: 541 cttttcatttcacacaccaattgagtgtgtttgccagggaaaaagtttttactaggctca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 cttttcatttcacacaccaattgagtgtgtttgccagggaaaaagtttttactaggctca 252
Query: 601 cttctcactcctctttttgatgcacaaagttagagtcagacctctggccaa 651
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 cttctcactcctctttttgatgcacaaagttagagtcagacctctggccaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1050
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1040
Effective search space: 666640
Effective search space used: 666640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
