Query= MSMg01no289_i12.b1 MSMg01no289_i12.b1 CHROMAT_FILE:
MSMg01no289_i12.b1 PHD_FILE: MSMg01no289_i12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:23:52 2005
(313 letters)
>mm_chr11_70323992_70324705
Length = 714
Score = 571 bits (295), Expect = e-167
Identities = 307/311 (98%), Gaps = 1/311 (0%)
Strand = Plus / Plus
Query: 4 ggaattcagctggtgaatgcgacctttggtgtgttgtgtggcgattgcaggaaaaaggag 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcagctggtgaatgcgacctttggtgtgttgtgtggcgattgcaggaaaaaggag 263
Query: 64 gtaggactgcttggcggcgttcttgggggtggaggctgagaaatcctgtttgatcttggc 123
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 264 gtaggactgcttgggggcgttcttgggggtagaggctgagaaatcctgtttgatcttggc 323
Query: 124 ttcatctttactctttctctttcttgcagggtgcagctcactgagtcccataggccaccc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttcatctttactctttctctttcttgcagggtgcagctcactgagtcccataggccaccc 383
Query: 184 ctaatacttcatttctggaagtctgagtggtcacccactccctggttggctagggaaaaa 243
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctaatacctcatttctggaagtctgagtggtcacccactccctggttggctagggaaaaa 443
Query: 244 aaaaa-catgcacacttttatcgttcaggctcttccttagtggaataaaccaccctgagc 302
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aaaaaacatgcacacttttatcgttcaggctcttccttagtggaataaaccaccctgagc 503
Query: 303 cccttccccca 313
|||||||||||
Sbjct: 504 cccttccccca 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 714
Length adjustment: 9
Effective length of query: 304
Effective length of database: 705
Effective search space: 214320
Effective search space used: 214320
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no289_i12.g1 MSMg01no289_i12.g1 CHROMAT_FILE:
MSMg01no289_i12.g1 PHD_FILE: MSMg01no289_i12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:23:52 2005
(338 letters)
>mm_chr11_70495516_70496253
Length = 738
Score = 607 bits (314), Expect = e-178
Identities = 332/338 (98%)
Strand = Plus / Minus
Query: 1 tccgtggaacagttggtgcaacagatcttggacacccacccaaccaacccagcacccaga 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 538 tccgtggaacagttggtgcaacagatcttggacacccacccaaccaagccagcacccaga 479
Query: 61 actcatgcttgtctctgcagtgggggccttggtaagtgacccccatactctggagctctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 actcatgcttgtctctgcagtgggggccttggtaagtgacccccatactctggagctctt 419
Query: 121 ttcccagctagccacatggcttagtaactgcctccatgagatttgcatactaatttgcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 ttcccagctagccacatggcttagtaactgcctccatgagatttgcatactaatttgcaa 359
Query: 181 gtctttgcatgcccgatgagcaaagaattcctgatctggaagcccaggccccagaaatgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gtctttgcatgcccgatgagcaaagaattcctgatctggaagcccaggccccagaaatgc 299
Query: 241 atgactacaatcctggaggtccacagcccttctgcccactgctttcattatctcctccca 300
||| || |||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 298 atggctgcaatcctggaggtccacagcccttctgcccactgctttcagtaactcctccca 239
Query: 301 ctacaccgcatgccaccaggcacttccagcctttgcat 338
||| ||||||||||||||||||||||||||||||||||
Sbjct: 238 ctagaccgcatgccaccaggcacttccagcctttgcat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
