Query= MSMg01no291_g19.b1 MSMg01no291_g19.b1 CHROMAT_FILE:
MSMg01no291_g19.b1 PHD_FILE: MSMg01no291_g19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:12 2005
(334 letters)
>mm_chr11_44403499_44404229
Length = 731
Score = 514 bits (266), Expect = e-150
Identities = 310/334 (92%), Gaps = 17/334 (5%)
Strand = Plus / Plus
Query: 1 ttatccgagaacctcagcactgatggagagtctgatgatggtcccatcatcatctcattg 60
||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||
Sbjct: 201 ttatccgagaacctcagcactgatggagagtct-a--aaggtcccatcatcatctcattg 257
Query: 61 cgggccagttccctgccatatcagcttgctgtgttgcaaggaacagaaaccagccttgag 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 258 cgggccagttccctgccatatcggcttgctgtgttgcaaggaacagaaaccagccttgag 317
Query: 121 ccggtgaacacggaagggtatcaatgttatggagaaaatagttatcccggaattaaatag 180
||||||||| |||||||||||| |||||||||| | ||||||||||
Sbjct: 318 ccggtgaactgggaagggtatcagtgttatggag--------------gaaattaaatag 363
Query: 181 ctacaaaccagaccgaggagctcaagccccagagagagctggacaattactcatgccagc 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ctacaaaccagactgaggagctcaagccccagagagagctggacaattactcatgccagc 423
Query: 241 cctccaacaggatatttatggactttaaacccaccaggcaattctctgggcagcacacca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 cctccaacaggatatttatggactttaaacccaccaggcaattctctgggcagcacacca 483
Query: 301 acatttcacaccctcaggcaaaaatgctatgcta 334
||||||||||||||||||||||||||||||||||
Sbjct: 484 acatttcacaccctcaggcaaaaatgctatgcta 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 731
Length adjustment: 9
Effective length of query: 325
Effective length of database: 722
Effective search space: 234650
Effective search space used: 234650
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no291_g19.g1 MSMg01no291_g19.g1 CHROMAT_FILE:
MSMg01no291_g19.g1 PHD_FILE: MSMg01no291_g19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:12 2005
(296 letters)
>mm_chr11_44553690_44554387
Length = 698
Score = 557 bits (288), Expect = e-163
Identities = 295/298 (98%), Gaps = 2/298 (0%)
Strand = Plus / Minus
Query: 1 gatttctttaaggtgaaagaattaaagagaggcatgcatg--cacacacacacatgtgca 58
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 498 gatttctttaaggtgaaagaattaaagagaggcatgcatgcacacacacacacatgtgca 439
Query: 59 cacatgcacacattctcacctacagagtctggtgttctctgccggggaacagcagggact 118
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 438 cacatgcacacattctcacctacagagtctggtgttctctgccggggaacagtagggact 379
Query: 119 atgaatggctcagttacagagccaggtcagaggaattttctccagccagtgtggaaggaa 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 atgaatggctcagttacagagccaggtcagaggaattttctccagccagtgtggaaggaa 319
Query: 179 aataaaatcctcatcctttctctgggaggcagacaatgcaaagggtggcatttagctcct 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 aataaaatcctcatcctttctctgggaggcagacaatgcaaagggtggcatttagctcct 259
Query: 239 ccgtgatctgagccaagggttgggggcagggagggggatgtggagtaaataccaactg 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ccgtgatctgagccaagggttgggggcagggagggggatgtggagtaaataccaactg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 698
Length adjustment: 9
Effective length of query: 287
Effective length of database: 689
Effective search space: 197743
Effective search space used: 197743
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
