Query= MSMg01no291_j11.b1 MSMg01no291_j11.b1 CHROMAT_FILE:
MSMg01no291_j11.b1 PHD_FILE: MSMg01no291_j11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:25 2005
(286 letters)
>mm_chr11_61395269_61395954
Length = 686
Score = 522 bits (270), Expect = e-153
Identities = 282/286 (98%)
Strand = Plus / Plus
Query: 1 tttgctggcaacacctttctaatgtcctacagttcaaagtaccctgcatgtcaaatgaca 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 201 tttgctggcaacacctttctaatgtccttcagttcaaagtaccctgcatgtcaaatgaca 260
Query: 61 cactggggacccaacaatctcattatagagaatagagcttagaggaaaagagaactgtct 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 261 cactggggacccaacaatctcattatagagaatggagcttagaggaaaagagaactgtct 320
Query: 121 tgaaataatagtgccttgccccatttacaactccagattgacaatgacagcagcctggca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaaataatagtgccttgccccatttacaactccagattgacaatgacagcagcctggca 380
Query: 181 agggtggagacagctctatcctctggaacagcctgaaagactctcctcagaggcttctgc 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agggtggagacagctccatcctctggaacagcctgaaagactctcctcagaggcttctgc 440
Query: 241 tgaggtgaagccgagacccacgagaaaggccaaggtctgagaacga 286
||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 441 tgaggtgaagccgagacccacgagaaaggtcaaggtctgagaacga 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no291_j11.g1 MSMg01no291_j11.g1 CHROMAT_FILE:
MSMg01no291_j11.g1 PHD_FILE: MSMg01no291_j11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:26:25 2005
(194 letters)
>mm_chr11_61561385_61561977
Length = 593
Score = 346 bits (179), Expect = e-100
Identities = 188/191 (98%), Gaps = 1/191 (0%)
Strand = Plus / Minus
Query: 1 ttttgttatgttttttcctgaattacttgataacattcatgttgatatgtcatatttttt 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 390 ttttgttatgttttttcctgaattacttg-taacattcatgttgatatgtcatatttttt 332
Query: 61 cagtaatattcaagtttcacgaggagaaaaataattttcagtcttttagactttaataca 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 cagtaatattcaagtttcaagaggagaaaaataattttcagtcttttagactttaataca 272
Query: 121 ggaaccattttgattttacaaatagttatatttttataaaccacatgttattttctgtta 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 271 ggaaccattttgattttacaaatagttatatttttataaaccacatgttcttttctgtta 212
Query: 181 aacatttttag 191
|||||||||||
Sbjct: 211 aacatttttag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 593
Length adjustment: 8
Effective length of query: 186
Effective length of database: 585
Effective search space: 108810
Effective search space used: 108810
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
