Query= MSMg01no293_d18.b1 MSMg01no293_d18.b1 CHROMAT_FILE:
MSMg01no293_d18.b1 PHD_FILE: MSMg01no293_d18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:35 2005
(318 letters)
>mm_chr11_103656411_103657131
Length = 721
Score = 567 bits (293), Expect = e-166
Identities = 310/317 (97%), Gaps = 3/317 (0%)
Strand = Plus / Plus
Query: 5 gaattctgtgtgtagccagcattgaggctgagctacccttctctgagtgctggaatacct 64
|||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 205 gaattctgtgtgtagccagcattgaggctgagctgcccttctctgagtgctagaatacct 264
Query: 65 agcgggagtcccgctagcagctaggagtgtggagtgggcactcacaaacccagagaagaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agcgggagtcccgctagcagctaggagtgtggagtgggcactcacaaacccagagaagaa 324
Query: 125 aggctaggcttggtggaggaactggaagcaggagcccaagactgg---atgtgaccgtgt 181
|||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 325 aggctaggcttggtggagaaactggaagcaggagcccaagactggtggatgtgaccgtgt 384
Query: 182 gggtgcggggcagggggtgcgcaggaaggtgttgaggctcgctccggggaatgggcccgg 241
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 385 gggtgcggggcagggggtgcgcaggaaggtgttgaggctcgctcccgggaatgggcccgg 444
Query: 242 gagggaggagcaggcagcgctttgaacttgcgctcagcctccagaaggagggcgggggaa 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gagggaggagcaggcagcgctttgaacttgcgctcagcctccagaaggagggcgggggaa 504
Query: 302 gtccaggtgccggccgg 318
|||||||||||||||||
Sbjct: 505 gtccaggtgccggccgg 521
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 721
Length adjustment: 9
Effective length of query: 309
Effective length of database: 712
Effective search space: 220008
Effective search space used: 220008
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no293_d18.g1 MSMg01no293_d18.g1 CHROMAT_FILE:
MSMg01no293_d18.g1 PHD_FILE: MSMg01no293_d18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:35 2005
(669 letters)
>mm_chr11_103827195_103828262
Length = 1068
Score = 1232 bits (637), Expect = 0.0
Identities = 658/665 (98%), Gaps = 1/665 (0%)
Strand = Plus / Minus
Query: 5 gcctcaataaaatggcgactggctgggggcgggaacagcaaccaaccaatcatccgccgc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 gcctcaataaaatggcgactggctgggggcgggaacagcaaccaaccaatcatccgccgc 809
Query: 65 ctcctgggtactcttgcgcctatgtccgcgaagttacttgaatgacaaaaaatctgacca 124
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 ctcctgggaactcttgcgcctatgtccgcgaagttacttgaatgacaaaaaatctgacca 749
Query: 125 atggaaatggcaataaggctggacgggagtaggtccgccccaccgcgacctaggcgacgg 184
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 748 atggaaatggcaataaggctggacgggagtaggtccgcccccccgcgacctaggcgacgg 689
Query: 185 taccacgctctggaaatgccggtttcatcttccaatgggagctcaccgcattcgggagag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 taccacgctctggaaatgccggtttcatcttccaatgggagctcaccgcattcgggagag 629
Query: 245 acgcgcccacatgccccacccgaagccacagacgaccaatcagaaaagctaaaagggttt 304
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 628 acgcgcccacatgccccacccgaagccacagacgaccaatcagaaaagc-aaaagggttt 570
Query: 305 tctatttgccctgccaatcaactctggtacttttcacggaccgaactaacccggggagca 364
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 569 tctatttgccctgccaatcaactctggtacttttcacggattgaactaacccggggagca 510
Query: 365 ttctgaccaacccaacgctggtatgtgggaggagccaggttcagagagatatttaaggaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ttctgaccaacccaacgctggtatgtgggaggagccaggttcagagagatatttaaggaa 450
Query: 425 atttgctgtggttgagctaaaagtagaaactggtttgggagcacagttcctggtcagaaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 atttgctgtggttgagctaaaagtagaaactggtttgggagcacagttcctggtcagaaa 390
Query: 485 tacccagattccaacatcgaaattaggcataaagaagatttcctatttggtatggagtta 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tacccagattccaacatcgaaattaggcataaagaagatttcctatttggtatggagtta 330
Query: 545 gactgcggctgttcttgtatacaaactttcaacattagggagaaatataatcaccagtac 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gactgcggctgttcttgtatacaaactttcaacattagggagaaatataatcaccagtac 270
Query: 605 cttagcagtctcccaaagcctcagtgcgcgtttcatgagaaagaccctaaattactcggt 664
|||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 269 cttagcagtctcccaaagcctcagtgcgcgtttcatgagaaagaccttaagttactcggt 210
Query: 665 actct 669
|||||
Sbjct: 209 actct 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1068
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1058
Effective search space: 697222
Effective search space used: 697222
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
