Query= MSMg01no294_a06.b1 MSMg01no294_a06.b1 CHROMAT_FILE:
MSMg01no294_a06.b1 PHD_FILE: MSMg01no294_a06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:35 2005
(324 letters)
>mm_chr11_19880563_19881292
Length = 730
Score = 598 bits (309), Expect = e-175
Identities = 317/323 (98%), Gaps = 6/323 (1%)
Strand = Plus / Minus
Query: 4 ggaattcttagccagaccccaacatactccaaacactattcttcctcattatcatccttg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ggaattcttagccagaccccaacatactccaaacactattcttcctcattatcatccttg 467
Query: 64 accaaaattagcaagttacggcataacaggtggctttcatttatagaatgtaaaattaat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 accaaaattagcaagttacggcataacaggtggctttcatttatagaatgtaaaattaat 407
Query: 124 gaaatttaaaggtggtttgtcttgaaaaacaagctggccattc------ttttttttttt 177
||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 406 gaaatttaaaggtggtttgtcttgaaaaacaagctggccattcttttttttttttttttt 347
Query: 178 taaagaaagaaaagaaaaaaaaagcacactataatctacaaacagaacatactgagcaaa 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 taaagaaagaaaagaaaaaaaaagcacactataatctacaaacagaacatactgagcaaa 287
Query: 238 ctccttccaagttttctaaatgtgctgaaaccaataaatgaaataaatctgtttaccagg 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ctccttccaagttttctaaatgtgctgaaaccaataaatgaaataaatctgtttaccagg 227
Query: 298 agtttaaaattcatacacctgaa 320
|||||||||||||||||||||||
Sbjct: 226 agtttaaaattcatacacctgaa 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 730
Length adjustment: 9
Effective length of query: 315
Effective length of database: 721
Effective search space: 227115
Effective search space used: 227115
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no294_a06.g1 MSMg01no294_a06.g1 CHROMAT_FILE:
MSMg01no294_a06.g1 PHD_FILE: MSMg01no294_a06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:35 2005
(292 letters)
>mm_chr11_19707929_19708620
Length = 692
Score = 561 bits (290), Expect = e-164
Identities = 290/290 (100%)
Strand = Plus / Plus
Query: 1 cttcagtgctgagatcacaggtatgtgccaggctcaaagatctttttagtcaagaagaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttcagtgctgagatcacaggtatgtgccaggctcaaagatctttttagtcaagaagaaa 260
Query: 61 acatgtaaccaggaaagaaaatgagacaaaagacagaaaatgaataacagacctacgaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acatgtaaccaggaaagaaaatgagacaaaagacagaaaatgaataacagacctacgaat 320
Query: 121 acacagtatccaatctgttaaccaagagcacaaataaaacagaaagttttcccatcacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acacagtatccaatctgttaaccaagagcacaaataaaacagaaagttttcccatcacat 380
Query: 181 aaaaacgctgtgtgtattcatgtgagtgtgtgcatatgtgtgtttcactacacgtgtgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaaacgctgtgtgtattcatgtgagtgtgtgcatatgtgtgtttcactacacgtgtgtg 440
Query: 241 catgtgcatgcggaagccagaggctatcctcacatgttattcctcagatg 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catgtgcatgcggaagccagaggctatcctcacatgttattcctcagatg 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
