Query= MSMg01no294_h11.b1 MSMg01no294_h11.b1 CHROMAT_FILE:
MSMg01no294_h11.b1 PHD_FILE: MSMg01no294_h11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:09 2005
(317 letters)
>mm_chr11_14583000_14583716
Length = 717
Score = 565 bits (292), Expect = e-165
Identities = 307/312 (98%)
Strand = Plus / Minus
Query: 4 ggaattctataactcacaggaaataatgattttctctttacatgctggatctccagtatt 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 ggaattctataactcaaaggaaataatgattttctctttacatgctggatctccagtatt 456
Query: 64 tgttaaagtagtacccaactattaaacatagcccttgagagtagtgcttggctttatttt 123
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tgttaaagtagtaaagaactattaaacatagcccttgagagtagtgcttggctttatttt 396
Query: 124 catagctaaacatcaatatttataatagttcaatagatgacagttcttggtgccttcctc 183
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 catagctaatcatcaatatttataatagttcaatagatgacagttcttggtgccttcctc 336
Query: 184 tcaatagctaatgattgtactgggttcttctagttgtacagagattggcaataagactta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tcaatagctaatgattgtactgggttcttctagttgtacagagattggcaataagactta 276
Query: 244 tataagatagttttcttttcctataagtaaggtctagaaaggatggaatatattcaacac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 tataagatagttttcttttcctataagtaaggtctagaaaggatggaatatattcaacac 216
Query: 304 tggaatacattg 315
||||||||||||
Sbjct: 215 tggaatacattg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no294_h11.g1 MSMg01no294_h11.g1 CHROMAT_FILE:
MSMg01no294_h11.g1 PHD_FILE: MSMg01no294_h11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:09 2005
(287 letters)
>mm_chr11_14498810_14499500
Length = 691
Score = 505 bits (261), Expect = e-147
Identities = 276/283 (97%), Gaps = 4/283 (1%)
Strand = Plus / Plus
Query: 9 ctcagtactatggagcaaaaatatctaggaacgaatttctgggtgacaggatacatgtat 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 ctcagtactatggagcaaaaatatctaggaacgaatttctgggtgacaggatacatgtat 268
Query: 69 tcataaacatgtaagatttgtagagattataacgctcaggtacaagtaagaatgaataac 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tcataaacatgtaagatttgtagagattataacgctcaggtacaagtaagaatgaataac 328
Query: 129 atatgcatatcaccttaaggagaggcccgtgggaactatgttcctcatgtcttgaagcag 188
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 329 atatgcatatcaccttaaggagaggcccgtgggaactgtgttcctcatgtcttgaagcag 388
Query: 189 cagaatatgtttgggttcccagaattctctctcaggctcgtgctcacagccaacggtc-- 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 cagaatatgtttgggttcccagaattctctctcaggctcgtgctcacagccaacggtcgg 448
Query: 247 --ctgcccgcggcaggtccttggttaccggaagctgtgaacat 287
||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 449 tcctgcccgtggcaggtccttggttcccggaagctgtgaacat 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 691
Length adjustment: 9
Effective length of query: 278
Effective length of database: 682
Effective search space: 189596
Effective search space used: 189596
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
