Query= MSMg01no294_k12.b1 MSMg01no294_k12.b1 CHROMAT_FILE:
MSMg01no294_k12.b1 PHD_FILE: MSMg01no294_k12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:23 2005
(318 letters)
>mm_chr11_14582999_14583716
Length = 718
Score = 574 bits (297), Expect = e-168
Identities = 309/313 (98%)
Strand = Plus / Minus
Query: 4 ggaattctataactcacaggaaataatgattttctctttacatgctggatctccagtatt 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ggaattctataactcaaaggaaataatgattttctctttacatgctggatctccagtatt 457
Query: 64 tgttaaagttgtaacgaactattaaacatagcccttgagagtagtgcttggctttatttt 123
||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tgttaaagtagtaaagaactattaaacatagcccttgagagtagtgcttggctttatttt 397
Query: 124 catagctaaacatcaatatttataatagttcaatagatgacagttcttggtgccttcctc 183
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 catagctaatcatcaatatttataatagttcaatagatgacagttcttggtgccttcctc 337
Query: 184 tcaatagctaatgattgtactgggttcttctagttgtacagagattggcaataagactta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tcaatagctaatgattgtactgggttcttctagttgtacagagattggcaataagactta 277
Query: 244 tataagatagttttcttttcctataagtaaggtctagaaaggatggaatatattcaacac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tataagatagttttcttttcctataagtaaggtctagaaaggatggaatatattcaacac 217
Query: 304 tggaatacattga 316
|||||||||||||
Sbjct: 216 tggaatacattga 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no294_k12.g1 MSMg01no294_k12.g1 CHROMAT_FILE:
MSMg01no294_k12.g1 PHD_FILE: MSMg01no294_k12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:30:23 2005
(286 letters)
>mm_chr11_14498810_14499495
Length = 686
Score = 462 bits (239), Expect = e-135
Identities = 268/283 (94%), Gaps = 11/283 (3%)
Strand = Plus / Plus
Query: 9 ctcagtactatggagcaaaaatatctaggaacgaatttctgggtgacaggatacatgtat 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 ctcagtactatggagcaaaaatatctaggaacgaatttctgggtgacaggatacatgtat 268
Query: 69 tcataaacatgtaaaatttgtagagattataacgctcaggtacaagtaagaatgaataac 128
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tcataaacatgtaagatttgtagagattataacgctcaggtacaagtaagaatgaataac 328
Query: 129 atatgcatatcaccttaaggagaggcccgtgggaactatgttcctcatgtcttgaagcag 188
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 329 atatgcatatcaccttaaggagaggcccgtgggaactgtgttcctcatgtcttgaagcag 388
Query: 189 cagaatatgtttgggttcccagaattctctctcaggctcgtgctcacagccaacggtc-- 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 cagaatatgtttgggttcccagaattctctctcaggctcgtgctcacagccaacggtcgg 448
Query: 247 --ctgctcg---cnnncaggtccttggttaccggaagctgtga 284
|||| || | |||||||||||| |||||||||||||
Sbjct: 449 tcctgcccgtggc----aggtccttggttcccggaagctgtga 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
