Query= MSMg01no296_e22.b1 MSMg01no296_e22.b1 CHROMAT_FILE:
MSMg01no296_e22.b1 PHD_FILE: MSMg01no296_e22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:27 2005
(278 letters)
>mm_chr11_99819095_99819771
Length = 677
Score = 522 bits (270), Expect = e-153
Identities = 276/278 (99%), Gaps = 1/278 (0%)
Strand = Plus / Plus
Query: 1 acagcctgactggccaatcatttctccaaagtccttggctccataaaaatctggattttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagcctgactggccaatcatttctccaaagtccttggctccataaaaatctggattttg 260
Query: 61 ccttgtttccatgatacctaaaggcagtagtgaaccagtttgtgataaaatataaaaata 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 ccttgtttccatgatacctaaaggcagaagtgaaccagtttgtgataaaatataaaaata 320
Query: 121 aacaaacagaaagcattttattcagtcctcgtttacaacattttagagtgtgttaggaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacaaacagaaagcattttattcagtcctcgtttacaacattttagagtgtgttaggaca 380
Query: 181 ttgtcacacagatatagttatgattttttaataactcaaagtttcttccacaagtgttaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgtcacacagatatagttatgattttttaataactcaaagtttcttccacaagtgttaa 440
Query: 241 aaaaaactaaatataagcctcagaataataatgtttaa 278
||||| ||||||||||||||||||||||||||||||||
Sbjct: 441 aaaaa-ctaaatataagcctcagaataataatgtttaa 477
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 278
Length of database: 677
Length adjustment: 9
Effective length of query: 269
Effective length of database: 668
Effective search space: 179692
Effective search space used: 179692
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no296_e22.g1 MSMg01no296_e22.g1 CHROMAT_FILE:
MSMg01no296_e22.g1 PHD_FILE: MSMg01no296_e22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:28 2005
(292 letters)
>mm_chr11_99994600_99995290
Length = 691
Score = 526 bits (272), Expect = e-154
Identities = 287/292 (98%), Gaps = 1/292 (0%)
Strand = Plus / Minus
Query: 1 agcagtcaactggctggccaggtcaatgtggaaatggacgcagcatctggcgtggacctg 60
||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||
Sbjct: 491 agcagtcaactggctggccaggtcaatgtggaaatggacgcagcacccggggtggacctg 432
Query: 61 acccgcatgctggcagagatgagggagcagtatgaagctattgcagagaaaaaccgtcgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 acccgcatgctggcagagatgagggagcagtatgaagctattgcagagaaaaaccgtcgg 372
Query: 121 gatgtagaggcctggttcttcagtaaggtgggtctgaccccctcctcacacccccaactc 180
||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 371 gatgtagaggcctggttcttcagtaaggtgggtctgacctcctcctcacacccc-aactc 313
Query: 181 cagctctgctctacctctcctcccctctccagaagcctctgaggaggcccatgaggctca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 cagctctgctctacctctcctcccctctccagaagcctctgaggaggcccatgaggctca 253
Query: 241 tgtttcttatccgtgacttgcagactgaagagctgaacaaggaggtggcgtc 292
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tgtttcttatccgtgacttgcagactgaagagctgaacaaggaggtggcgtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 691
Length adjustment: 9
Effective length of query: 283
Effective length of database: 682
Effective search space: 193006
Effective search space used: 193006
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
