XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCATGC
TGTACTAAACAACTGTGATGGGGTGGCACAGAGCATGTGGAAGTGTCCAA
CCACTGACTAGTCCACCTTGAGGACTACTCCACAAGAGGGAGTTCAAACC
TGAGACTGATTAGAGAGCTAGGTGCCACCAGATGCTGGATAGGCCAGAGA
TTGAGGATAGAACTTAAAGTGTTTGGGGTTTGGGGATGGGGATTCAAGAA
AATGATTACTAATGGTATTCTACATTACTCATAGATTGGTTCCTAGCCTA
ATTATCATCATAGGAGCTTCATCCAGAAAGTAAGAGTACCAGATACAGAG
ACCCATAGCCAAACATTAAGTGATGCTTGGGAACTCTTAAGAAGAGGATG
CAGGATTATAAGAGCCAGAGGGATCAAGGATACCAGGAGAACACAGCCCA
CTGAATCGACTAGCCAGGGCTCACAGAGACTCAAGCAACAACCACAGTGC
CTATGTGGGTAATTGCTAGGTCCTCTACATATATGTTATATTGTGTAGGT
TTGCGTTTTCTAGGACTTCTAACATTGTGAGTCAGGATTGTCTCTTACTC
CTTTGCCTGCACTTGGGATGTTTTTCCTCCTACTGGTTTGCCTCTTCCAG
GCTTGATATAAAGGTTTGTACCTAATCTTTATTCCACCTGTTATTCTGTA
TTTGGCTGGCN

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXTACAAACGAGGAGGTGA
CACTATAGAAGTTCCAGAAAAATTCCAATATCCATTAACCCCAAATCTGC
GACTAATTAATTATTTCTTGCTCTAATTTCTGGACATTTTGAAATAAGGT
TAAATTCATTTCCTTTTCCCCAAACATATTTTTTAAGTTTACTATTATGG
TTTAACTTATTTTATGAATATTGACATTTTCTTGCATTGTATGCACCAAA
TACAGGCCTGGTGCCTAAACAGGTCAGAAGGCTGTGTTGGTTCCTCTGGA
ACTGGAGTTACATGTGATTTGTAATATACATGGCTGTGCTAGGACTTGAA
CTTGGGTTTTCTGAAGGAGAAATCAGTTCTAGAAAGTAGACTGCTAGAGG
TGAATACATAACAAGTGTGAAAATATAATAGAATTCACAACATAAGGCCA
AATTTTAAGTTCTCCTGCATTGAAACAGAGGGTATAAAGGATATTTCATT
ATGTTAATGGATATCCATCTTCTATAAGTGGGGACAATAAATATTTTGTT
ATAAAACTGAACGAATTTTAATGTGTTAAATCCCTATAATGTTGCTTATG
GCCATGCCTTGGAGCTCTAACAGTAATGCAAATAATATTATATGGTCAGG
GCTTCAAGTGATGAGATTCAGATATCTGTATTTGAGAGCCATTTGGTGTT
TATGAAAGTGCAATGTCTCACAAA

Query= MSMg01no298_g16.g1 MSMg01no298_g16.g1 CHROMAT_FILE:
MSMg01no298_g16.g1 PHD_FILE: MSMg01no298_g16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:06 2005
         (579 letters)



>mm_chr11_91473100_91474078
          Length = 979

 Score = 1021 bits (528), Expect = 0.0
 Identities = 567/580 (97%), Gaps = 1/580 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccaatatccattaaccccaaatctgcgactaattaattatttcttgctctaatttctgga 60
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 200 ccaatatccattaaccccaaatctgtgactaattaattatttcttgctctaatttctgga 259

                                                                       
Query: 61  cattttgaaataaggttaaattcatttcctttt-ccccaaacatattttttaagtttact 119
           ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 260 cattttgaaataaggttaaattcatttccttttcccccaaacatatttttcaagtttact 319

                                                                       
Query: 120 attatggtttaacttattttatgaatattgacattttcttgcattgtatgcaccaaatac 179
           |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 attatggtttaatttcttttatgaatattgacattttcttgcattgtatgcaccaaatac 379

                                                                       
Query: 180 aggcctggtgcctaaacaggtcagaaggctgtgttggttcctctggaactggagttacat 239
           |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 380 aggcctggtgcctaaacaggtcagaaggctgtgttgattcctctggaactgcagttacat 439

                                                                       
Query: 240 gtgatttgtaatatacatggctgtgctaggacttgaacttgggttttctgaaggagaaat 299
           |||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gtgatttggagcatacatggctgtgctaggacttgaacttgggttttctgaaggagaaat 499

                                                                       
Query: 300 cagttctagaaagtagactgctagaggtgaatacataacaagtgtgaaaatataatagaa 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cagttctagaaagtagactgctagaggtgaatacataacaagtgtgaaaatataatagaa 559

                                                                       
Query: 360 ttcacaacataaggccaaattttaagttctcctgcattgaaacagagggtataaaggata 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttcacaacataaggccaaattttaagttctcctgcattgaaacagagggtataaaggata 619

                                                                       
Query: 420 tttcattatgttaatggatatccatcttctataagtggggacaataaatattttgttata 479
           |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 620 tttcattatgttaatgaatatccatcttctataagtggagacaataaatattttgttata 679

                                                                       
Query: 480 aaactgaacgaattttaatgtgttaaatccctataatgttgcttatggccatgccttgga 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 680 aaactgaacgaattttaatgtgttaaatccctataatgttgcttatggccatgccctgga 739

                                                   
Query: 540 gctctaacagtaatgcaaataatattatatggtcagggct 579
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gctctaacagtaatgcaaataatattatatggtcagggct 779


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space:   551361
Effective search space used:   551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)