Query= MSMg01no301_a13.b1 MSMg01no301_a13.b1 CHROMAT_FILE:
MSMg01no301_a13.b1 PHD_FILE: MSMg01no301_a13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:38:19 2005
(698 letters)
>mm_chr11_72601558_72602659
Length = 1102
Score = 967 bits (500), Expect = 0.0
Identities = 545/568 (95%), Gaps = 14/568 (2%)
Strand = Plus / Minus
Query: 6 ggaattcatgtagccctcaccggtctcaaactcactatgtagatcgggctagccttgaat 65
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ggaattcatgtagcccagagaggtctcaaactcactatgtagatcgggctagccttgaat 499
Query: 66 tcctgatcctactgcctccatctcctgagtgatcaaacatatattgatgccagctgtgtt 125
||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 498 tcctgatcctactgcctccatctcctgagtgatcaaacatatattaatgccagc------ 445
Query: 126 aatatgtgttaatatgtgttaatatgtggggtcctacacccactacttactgtgataaaa 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ----tgtgttaatatgtgttaatatgtggggtcctacacccactacttactgtgataaaa 389
Query: 186 gagagaaagcaactcttaaatggggagacagcctt----acagtgatcactacagtcttt 241
||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 388 gagggaaagcaactcttaaatggggagacagccttacagacagtgatcactacagtcttt 329
Query: 242 ttctttttttcaagacagggtttctctgtgtagccctggctgtcctggaactcactctat 301
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 328 ttctttttttcaagacagggtttctctgtgtagccctggctgtcctggagctcactctat 269
Query: 302 agaccaggctgtcctggaactcataaatccacctgcctctgcctcccaagtgctgggatt 361
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 268 agaccaggctgtcctggaactcagaaatccacctgcctctgcctcccaagtgctgggatt 209
Query: 362 aaaggcgtgtgccaccactgcccagctggtcactacagtctttcctaagctctgactgct 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 aaaggcgtgtgccaccactgcccagctggtcactacagtctttcctaagctctgactgct 149
Query: 422 agctaggatggctaaggccagtcctttcatcggtgtgcagccccacaatgaagccccaca 481
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 agctaggatggctgaggccagtcctttcatcggtgtgcagccccacaatgaagccccaca 89
Query: 482 tgggcatgtctgagttctttcagataccaatgtccccttgcggttggaataagtctagat 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 tgggcatgtctgagttctttcagataccaatgtccccttgcggttggaataagtctagat 29
Query: 542 tagcattttctgcccctaatgcctctga 569
||||||||||||||||||||||||||||
Sbjct: 28 tagcattttctgcccctaatgcctctga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 698
Length of database: 1102
Length adjustment: 10
Effective length of query: 688
Effective length of database: 1092
Effective search space: 751296
Effective search space used: 751296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no301_a13.g1 MSMg01no301_a13.g1 CHROMAT_FILE:
MSMg01no301_a13.g1 PHD_FILE: MSMg01no301_a13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:38:20 2005
(637 letters)
>mm_chr11_72438278_72439314
Length = 1037
Score = 1216 bits (629), Expect = 0.0
Identities = 635/637 (99%)
Strand = Plus / Plus
Query: 1 atgtatatgtgcttgccaggtatatgcatacctgcagaggccagaagagggtgtctgatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgtatatgtgcttgccaggtatatgcatacctgcagaggccagaagagggtgtctgatt 260
Query: 61 ctctttagctgaaattacaggtggaattaccactttacaagggttctgggaactaaacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctctttagctgaaattacaggtggaattaccactttacaagggttctgggaactaaacac 320
Query: 121 aggttctggagagcagcatgtgctcttaaccactcagctttctttccagcctacttttag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggttctggagagcagcatgtgctcttaaccactcagctttctttccagcctacttttag 380
Query: 181 gtaaaatttaactccattgagagttttctaaattagttatcttaacaatgttatattgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtaaaatttaactccattgagagttttctaaattagttatcttaacaatgttatattgaa 440
Query: 241 cttttccttgcctatctgtcctttattactagaatgacaattatgcttttgtttagtaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttttccttgcctatctgtcctttattactagaatgacaattatgcttttgtttagtaca 500
Query: 301 gaagacagtcaacctttgtaattactataaaataatatagtagagagagttgggtaaaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaagacagtcaacctttgtaattactataaaataatatagtagagagagttgggtaaaat 560
Query: 361 attgctgtggcatttgaggtaggacaaaacagtaaagttgaaatgacccatggcacttaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 attgctgtggcatttgaggtaggacaaaacagtaaagttgaaatgacccatggcacttaa 620
Query: 421 gtgttgcaggatatttgatcacactgtaaacccccaaagactttgttatttacctaaaag 480
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtgttgcagggtatttgatcacactgtaaacccccaaagactttgttatttacctaaaag 680
Query: 481 accttgttgtggtgtgtctcagcccttgcacacacctctactccaagagctaaataaagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 accttgttgtggtgtgtctcagcccttgcacacacctctactccaagagctaaataaagt 740
Query: 541 cagtcctaggtcatgaggcaggaagcaagtaatcagcccacagggagtgaacatagtaag 600
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 741 cagtcctaggtcatgaggcagggagcaagtaatcagcccacagggagtgaacatagtaag 800
Query: 601 caggaaggagggtctttaagttgaagggtatttaaga 637
|||||||||||||||||||||||||||||||||||||
Sbjct: 801 caggaaggagggtctttaagttgaagggtatttaaga 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space: 643929
Effective search space used: 643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
