Query= MSMg01no301_p08.b1 MSMg01no301_p08.b1 CHROMAT_FILE:
MSMg01no301_p08.b1 PHD_FILE: MSMg01no301_p08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:29 2005
(637 letters)
>mm_chr11_81920574_81921610
Length = 1037
Score = 1137 bits (588), Expect = 0.0
Identities = 617/630 (97%), Gaps = 6/630 (0%)
Strand = Plus / Plus
Query: 8 gaattctactgatcactgaagttacaaatgacacccatgctcaacaacttgttctaaaac 67
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattctactgagcactgaagttacaaatgacacccatgctcaacaacttgttctaaaac 267
Query: 68 acaaaagcagaatgagcacttgcaaatgcacttcaagatatacatagacagagagacatg 127
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 268 acaaaagcagaatgaacacttgcaaatgcacttcaagatatacatagagagagagacatg 327
Query: 128 ttgtgctgtgctgagactacaagtaataagagccaatattatcatctgttttctctttgc 187
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 328 ttgtgctgtgctgagactacaagtaataagagccaatattatcatctgtttgctctttgc 387
Query: 188 aacttagcagaagccagataatatatcaagcaaaagaaaagcatgatccatgtgtatcct 247
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 aacctagcagaagccagataatatatcaagcaaaagaaaagcatgatccatgtgtatcct 447
Query: 248 ggcccttcctggatacctagtccagctgaaaagggtcatctccagcctcatggaagacaa 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ggcccttcctggatacctagtccagctgaaaagggtcatctccagcctcatggaagacaa 507
Query: 308 tctgtcagaaagagggaaagagagtgattgaggtaggcatgccaatgtcagcctctaacc 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tctgtcagaaagagggaaagagagtgattgaggtaggcatgccaatgtcagcctctaacc 567
Query: 368 acagacaaacctataggcgagcatatccacacatacactagcaagcaccagtgtaagaga 427
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 568 acagacaaacctataggcgagcatatccacacatgcactagcaagcaccagtgtaaga-- 625
Query: 428 gagacagagacagagacagagagacatagagagagactgatacagagagagacttaaaac 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 ----cagagacagagacagagagacatagagagagactgatacagagagagacttaaaac 681
Query: 488 tattcaaaattgattattgtaacccatcacatcaatcagctgaaggatcaaaggtcacat 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tattcaaaattgattattgtaacccatcacatcaatcagctgaaggatcaaaggtcacat 741
Query: 548 gatgtcatcaatagaccctgaaaagcattgaacaaaagtgcacacccatcagggttctaa 607
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 gatgtcatcaatagatcctgaaaagcattgaacaaaagtgcacacccatcagggttctaa 801
Query: 608 aggcaaaattacttgtcaaaatgcttggaa 637
||||||||||||||||||||||||||||||
Sbjct: 802 aggcaaaattacttgtcaaaatgcttggaa 831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space: 643929
Effective search space used: 643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no301_p08.g1 MSMg01no301_p08.g1 CHROMAT_FILE:
MSMg01no301_p08.g1 PHD_FILE: MSMg01no301_p08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:29 2005
(324 letters)
>mm_chr11_82084195_82084918
Length = 724
Score = 607 bits (314), Expect = e-178
Identities = 320/322 (99%)
Strand = Plus / Minus
Query: 2 ccttggaagagagttcttgcaagacgtctaggggaaagaagtttgcaagaaacccattcc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ccttggaagagagttcttgcaagacgtctaggggaaagaagtttgcaagaaacccattcc 434
Query: 62 tccctcaacatactgtgagttctgaattccaccctcccccaatcccatacgcacgttgaa 121
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tccctcaacatactgtgagctctgaattccaccctcccccaatcccatacgcacgttgaa 374
Query: 122 ctatggctgaccaggtgtttcccaagccactcaaatgaactccaaagtagaaaggatcca 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ctatggctgaccaggtgtttcccaagccactcaaatgaactccaaagtagaaaggatcca 314
Query: 182 cgctacatcatttgggacctagtgtacccaacctttcttatgatgattctgtctggtcct 241
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 cgatacatcatttgggacctagtgtacccaacctttcttatgatgattctgtctggtcct 254
Query: 242 ggaactggtaggtttctttgaagaaggtggatgatgcttgagtagtagtattaggaggag 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ggaactggtaggtttctttgaagaaggtggatgatgcttgagtagtagtattaggaggag 194
Query: 302 gagaaggaggaagaagaggagg 323
||||||||||||||||||||||
Sbjct: 193 gagaaggaggaagaagaggagg 172
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
