Query= MSMg01no302_h17.b1 MSMg01no302_h17.b1 CHROMAT_FILE:
MSMg01no302_h17.b1 PHD_FILE: MSMg01no302_h17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:08 2005
(319 letters)
>mm_chr11_97678590_97679311
Length = 722
Score = 588 bits (304), Expect = e-172
Identities = 312/316 (98%), Gaps = 3/316 (0%)
Strand = Plus / Minus
Query: 5 gaattccatctcaaactacataggtaatgccagcccagccaaggatacagtgagatcccg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 gaattccatctcaaactacataggtaatgccagcccagccaaggatacagtgagatcccg 535
Query: 65 gctcaaaacaacaacaacaacaaaagacaaaagac---aaaaaaaaaaagagaagccaac 121
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 534 gctcaaaacaacaacaacaacaaaagacaaaagacaaaaaaaaaaaaaagagaagccaac 475
Query: 122 aaccaaagagggagccccacaaaagcagctcttccctttttgacaatacgattgtgagaa 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 aaccaaagagggagccccacaaaagcagctcttccctttttgacaatacgattgtgagaa 415
Query: 182 ctgatacacacagggcctcctgcctctcagtaagaagctaagagaacgttatggcagccc 241
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 414 ctgatacacacagggcctcctgcctctcagtaagaaactaagagaacgttatggcagccc 355
Query: 242 acagcagaccctagagtctaggaacctccgagtctgtgtgtggagagcagggcagcccta 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 acagcagaccctagagtctaggaacctccgagtctgtgtgtggagagcagggcagcccta 295
Query: 302 caaacagcaagggcag 317
||||||||||||||||
Sbjct: 294 caaacagcaagggcag 279
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 722
Length adjustment: 9
Effective length of query: 310
Effective length of database: 713
Effective search space: 221030
Effective search space used: 221030
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no302_h17.g1 MSMg01no302_h17.g1 CHROMAT_FILE:
MSMg01no302_h17.g1 PHD_FILE: MSMg01no302_h17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:08 2005
(291 letters)
>mm_chr11_97497106_97497795
Length = 690
Score = 491 bits (254), Expect = e-143
Identities = 275/282 (97%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 1 catcccaacctcagctacggaagaagaacccatctgactgcacagcgtttgctttctctt 60
||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||
Sbjct: 201 catcccaacctcagctacggaagaacaacccatctgactgcacagcatt-gctttctctt 259
Query: 61 acacatctagttgacagtggagttgccagatgattaaatgggggcgtttctgttagattt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 260 acacatctagttgacagtggagttgccagatgattaaatgggggcgtttctgttaggttt 319
Query: 121 atttatctttttagtgccggggatttagtgcccctgagccctgtgtgatctagagagcgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atttatctttttagtgccggggatttagtgcccctgagccctgtgtgatctagagagcgc 379
Query: 181 ttccctgctgccccacacatcacgaggcctatgttggactttatacttacttatttgtga 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttccttgctgccccacacatcacgaggcctatgttggactttatacttacttatttgtga 439
Query: 241 gcatccgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgt 282
|||||| ||||||||||||||||||||||||| |||||||||
Sbjct: 440 gcatccatgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgt 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 690
Length adjustment: 9
Effective length of query: 282
Effective length of database: 681
Effective search space: 192042
Effective search space used: 192042
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
