Query= MSMg01no303_e11.b1 MSMg01no303_e11.b1 CHROMAT_FILE:
MSMg01no303_e11.b1 PHD_FILE: MSMg01no303_e11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:41:09 2005
(311 letters)
>mm_chr11_7190208_7190917
Length = 710
Score = 563 bits (291), Expect = e-165
Identities = 303/307 (98%), Gaps = 1/307 (0%)
Strand = Plus / Minus
Query: 4 ggaattcaaatgcataggtgcagaggccacactgcattgactatcctctaacaaatagta 63
|||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 509 ggaa-tcaaatgcataggtgcagaggccacgctgcattgactatcctctaacaaatagta 451
Query: 64 atgacttagatgccattacctgggcagtaactatattctaattatcatatgtgatcttct 123
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 450 atgacttagatgccattacctgggccgtaactatattctaattatcatatgtgatcttct 391
Query: 124 ccgctcccagaggaatatgattacgtgagaccacatatccagaatatcccttgttgctgc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ccgctcccagaggaatatgattacgtgagaccacatatccagaatatcccttgttgctgc 331
Query: 184 cagaacccctcgtctgcttccctctatggctctgctgtttctcaggacagctgggcctct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 cagaacccctcgtctgcttccctctatggctctgctgtttctcaggacagctgggcctct 271
Query: 244 gtctatgtgcctctgaccttgaggggaaagaacacctgagggaaggcaccaatgtctgcc 303
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 gtctatgagcctctgaccttgaggggaaagaacacctgagggaaggcaccaatgtctgcc 211
Query: 304 tggcaca 310
|||||||
Sbjct: 210 tggcaca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 710
Length adjustment: 9
Effective length of query: 302
Effective length of database: 701
Effective search space: 211702
Effective search space used: 211702
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no303_e11.g1 MSMg01no303_e11.g1 CHROMAT_FILE:
MSMg01no303_e11.g1 PHD_FILE: MSMg01no303_e11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:41:09 2005
(241 letters)
>mm_chr11_7024073_7024712
Length = 640
Score = 418 bits (216), Expect = e-121
Identities = 234/240 (97%), Gaps = 1/240 (0%)
Strand = Plus / Plus
Query: 1 tgctgaattgtgatttaaggtcaggagttgactgggaaatggtggcaaggatggtgagga 60
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgctcaattgtgatttgaggtcaggagttgactgggaaatggtggcaaggatggtgagga 260
Query: 61 gcagaggagccaaatagggaagaagccgatgccactctcaggaggagaggcgttcacccc 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 261 gcagaggagccaaatagggaagaagtcgatgccactctcaggaggagaggcgttcacccc 320
Query: 121 tgggtccatccgtggggaagtggggggagggcaaaggcgtctagtaataagtgttcgttc 180
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 321 tgggtccatccatggggaagtggggagagggcaaaggcgtctagtaataagtgttcgttc 380
Query: 181 agaaaatggctaccaagtccccactgtggactgcatggttttatttttttcctagatgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 agaaaatggctaccaagtccccactgtggactgcatggttttatttttt-cctagatgtc 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 640
Length adjustment: 9
Effective length of query: 232
Effective length of database: 631
Effective search space: 146392
Effective search space used: 146392
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
