Query= MSMg01no304_a14.b1 MSMg01no304_a14.b1 CHROMAT_FILE:
MSMg01no304_a14.b1 PHD_FILE: MSMg01no304_a14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:42:08 2005
(618 letters)
>mm_chr11_76684750_76685766
Length = 1017
Score = 731 bits (378), Expect = 0.0
Identities = 396/402 (98%), Gaps = 4/402 (0%)
Strand = Plus / Minus
Query: 196 gagatgagtacaagtcatctaaataaggaacaaaagctctatcttcctctatttgtaggt 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 gagatgagtacaagtcatctaaataaggaacaaaagctctatcttcctctatttgtaggt 958
Query: 256 gacatggtctcatctttaaataaacaagcccaaggtatccactaaaaatttagaataagt 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 957 gacatggtctcatctttaaataaacaagcccaaggtatccactaaaaatttagaataagt 898
Query: 316 tcagcaaagctacacaaaacaagagattcattggttgtacttaaaaaaaaaatgctgttt 375
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 897 tcagcaaagctacacaaaacaagagattcattggttgtactt-aaaaaaaaatgctgttt 839
Query: 376 tccagacagggtcttgttgtgtagctcaggctagctttgaattctcaattctcctgcttt 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838 tccagacagggtcttgttgtgtagctcaggctagctttgaattctcaattctcctgcttt 779
Query: 436 ggcatctaaaatgctgggatcatgtggtcccctgttctgcttctcttcttggggggatac 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 ggcatctaaaatgctgggatcatgtggtcccctgttctgcttctcttcttggggggatac 719
Query: 496 ctgggcaccactcttataccaagaaggcagggaggatgaggaatccacagtctgagtttc 555
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 718 ctgggcaccactcttataccaagaa-gcagggaggatgaggaatccacagtctgagtttc 660
Query: 556 cctatatatatatatatatatatat-atatatatatatatat 596
|| |||||||||||||||||||||| ||||| || |||||||
Sbjct: 659 cccatatatatatatatatatatatgatata-atttatatat 619
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1017
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1007
Effective search space: 612256
Effective search space used: 612256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no304_a14.g1 MSMg01no304_a14.g1 CHROMAT_FILE:
MSMg01no304_a14.g1 PHD_FILE: MSMg01no304_a14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:42:08 2005
(633 letters)
>mm_chr11_76509229_76510262
Length = 1034
Score = 1156 bits (598), Expect = 0.0
Identities = 625/634 (98%), Gaps = 3/634 (0%)
Strand = Plus / Plus
Query: 2 tcttagtgagaggctgtctttt-aaacaaacacctctaag-ccttggagttgatttttat 59
|||||||||||||||||||||| ||||||||||||||||| || ||||||||||||| ||
Sbjct: 202 tcttagtgagaggctgtcttttaaaacaaacacctctaagtcc-tggagttgattttgat 260
Query: 60 tggtccacttggtgtcacatgatcatcatctacccaatcaccaaggccacagtcttctca 119
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 tggtccacttggtgtcacatgatcatcacctacccaatcaccaaggccacagtcttctca 320
Query: 120 ttggccggagttcctgtatcaagagccccaaaacaaagcagtccctgaccctgtacctca 179
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 ttggccggagttcctgtatcaagagccctaaaacaaagcagtccctgaccctgtacctca 380
Query: 180 tcctggttaccatttcccactaagacacaattcagtaccggctcgtggctctttaaatca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcctggttaccatttcccactaagacacaattcagtaccggctcgtggctctttaaatca 440
Query: 240 ggccccgaagacccagtattctcagcgcggtttcactgtaatctttcttttctttacagt 299
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 441 ggccccgaagacccagtgttctcagcgcggtttcactgtaacctttcttttctttacagt 500
Query: 300 tccgaagtaaccgcggagctgtttctagcagaggtagaggcagatgccggccagctggag 359
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 501 tccgaagtaaccgcggagctgtttctagcagaggcagaggcagatgccggccagctggag 560
Query: 360 atctccgaacctacatgtccccacacattacaaaggacaggatggtgggtgctgagtgcc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atctccgaacctacatgtccccacacattacaaaggacaggatggtgggtgctgagtgcc 620
Query: 420 cacctgtccctaagatccaaaagcacaaacttggagggaaatctctccatcactccattg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cacctgtccctaagatccaaaagcacaaacttggagggaaatctctccatcactccattg 680
Query: 480 ccagcccacggcagacgggagggaaaatctgaaatgaagttggctgtggactcaatctca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ccagcccacggcagacgggagggaaaatctgaaatgaagttggctgtggactcaatctca 740
Query: 540 gagtcacatctctcgggcttgtttctcatcccacaattcctgggacttacacgtagcgta 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gagtcacatctctcgggcttgtttctcatcccacaattcctgggacttacacgtagcgta 800
Query: 600 aactgccagaatgggaagaaaatcagccccatag 633
||||||||||||||||||||||||||||||||||
Sbjct: 801 aactgccagaatgggaagaaaatcagccccatag 834
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1034
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1024
Effective search space: 637952
Effective search space used: 637952
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
