Query= MSMg01no306_a09.b1 MSMg01no306_a09.b1 CHROMAT_FILE:
MSMg01no306_a09.b1 PHD_FILE: MSMg01no306_a09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:46:40 2005
(650 letters)
>mm_chr11_102672419_102673467
Length = 1049
Score = 1162 bits (601), Expect = 0.0
Identities = 626/635 (98%), Gaps = 5/635 (0%)
Strand = Plus / Plus
Query: 1 cagctggaaaagtatgggattgcacattcatccacaatgcctcttaagtggtactgtctg 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 cagctggaaaagtatgggattgcacattcacccacaatgcctcttaagtggtactgtctg 260
Query: 61 cattcagaaaggacagtactggtatccatgtctaaaacagcctaagcttccatcaatcaa 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 cattcagaaaggacagtactggtacccatgtctaaaacagcctaagcttccatcaatcaa 320
Query: 121 gaattctaaatcatgttcaggcttggaaaataaacatttccaatattaactaggattgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaattctaaatcatgttcaggcttggaaaataaacatttccaatattaactaggattgtg 380
Query: 181 gaaggtctcacatcatacagcaatggcaacggtcagctggtatacctcgtgaagcaatct 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 gaaggtctcacatcatacagcaatggcaactgtcagctggtatacctcgtgaagcaatct 440
Query: 241 ttaccatgaactgaaataccactgggcccagtggcacactcgaggcaggggcaggacagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttaccatgaactgaaataccactgggcccagtggcacactcgaggcaggggcaggacagt 500
Query: 301 cactgttcagtcaaggacatttggtctacacagtctctcaaaaagctactcttcaacaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cactgttcagtcaaggacatttggtctacacagtctctcaaaaagctactcttcaacaag 560
Query: 361 aaaaaactctaaaatgccatcttatggtgggtaatacatttgtaattattcctaaataca 420
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaaaa-ctctaaaatgccatcttatggtgggtaatacatttgtaattattcctaaataca 619
Query: 421 gaatatttgctataagaaatcttatataacttgttataaccctctataatgaaataatat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gaatatttgctataagaaatcttatataacttgttataaccctctataatgaaataatat 679
Query: 481 acaatgactttgagagggtaggggtgagggtagattgagacagggtcttactatgtcact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 acaatgactttgagagggtaggggtgagggtagattgagacagggtcttactatgtcact 739
Query: 541 gtgtagccctggctagccttgactctcttgcctctacttccgaaatgctaggattcccac 600
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gtgtagccctagctagccttgactctcttgcctctacttccgaaatgctaggattcccac 799
Query: 601 tgtgtgtcaacctacatc-ta--taactttaaaaa 632
|||||||||||||||||| || |||||| |||||
Sbjct: 800 tgtgtgtcaacctacatcctacataactt-aaaaa 833
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1049
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1039
Effective search space: 664960
Effective search space used: 664960
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no306_a09.g1 MSMg01no306_a09.g1 CHROMAT_FILE:
MSMg01no306_a09.g1 PHD_FILE: MSMg01no306_a09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:46:40 2005
(288 letters)
>mm_chr11_102831584_102832276
Length = 693
Score = 487 bits (252), Expect = e-142
Identities = 281/294 (95%), Gaps = 7/294 (2%)
Strand = Plus / Minus
Query: 1 tgttgcctggtccctgggcccagagcagctgctccctcgtttaattaacgcgcactggtt 60
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 493 tgttgcctggtccctgggcccagagcagctgctccctcgtttaattaatg-gcactggtt 435
Query: 61 ccgagttcttgatgaagggtgatcatgagctatcgctcccctcaagtctccatggggctt 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ccgagttcttgatgaagggcgatcatgagctatcgctcccctcaagtctccatggggctt 375
Query: 121 tccattaagcaagagtttcaggaggggttgggaga------gacagctcacagggctgcc 174
||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 374 tccattaagcaagagtttcaggaggggttgggagagacggggacagctcacagggctgcc 315
Query: 175 tcactgataactgcatcccttcccaactctcaacccctcttttgccctcacctcatcctt 234
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tcactgagaactgcatcccttcccaactctcaacccctcttttgccctcacctcatcctt 255
Query: 235 ccctcttccctttgttttgttcgctggtcttccacgctcttatgagtctcctcc 288
||||||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 254 ccctcttccctttgtcttggccgctggtcttccacgctcttatgagtctcctcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 693
Length adjustment: 9
Effective length of query: 279
Effective length of database: 684
Effective search space: 190836
Effective search space used: 190836
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
