Query= MSMg01no307_b11.b1 MSMg01no307_b11.b1 CHROMAT_FILE:
MSMg01no307_b11.b1 PHD_FILE: MSMg01no307_b11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:03 2005
(621 letters)
>mm_chr11_81698020_81699040
Length = 1021
Score = 1139 bits (589), Expect = 0.0
Identities = 613/621 (98%)
Strand = Plus / Plus
Query: 1 caagcaagggacccagtcttgcccaatgggcagacttcctggaggcttaacaacttgaaa 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caagcaagggacccagtctttcccaatgggcagacttcctggaggcttaacaacttgaaa 260
Query: 61 agggcaaccatgttaagactagagaagcccatcagaatggctcttggcctatgtgtgtgt 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agggaaaccatgttaagactagagaagcccatcagaatggctcttggcctatgtgtgtgt 320
Query: 121 ttctttcatagtccatgggaacaagagtccagtaagggatgagaagaagaagacagtaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttctttcatagtccatgggaacaagagtccagtaagggatgagaagaagaagacagtaca 380
Query: 181 catctcagcagctagattgtgcacaactgccacatgtagttcagatttattttatatgtg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 catctcagcagctagattgtgcacaactgccacatgtagttcagatttattttataggtg 440
Query: 241 acaggaaactgctccatagatttaagatgcaaagaggcatgctttgatttatactttaaa 300
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acaggaaactgttcaatagatttaagatgcaaagaggcatgctttgatttatactttaaa 500
Query: 301 ataacattatggaaaattccaaagcacacccaaagtcatcaaaatagtagcaggaacacc 360
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 501 ataacattatggaaaattccaaagcacacccaacgtcatcaaaatagtagcaggaacacc 560
Query: 361 ctttgcccatcactgagttcaacaacatctcacagcctaccattcctgtatccacccact 420
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 561 ctttgcccatcactgagttcaacaacgtctcacagcctaccattcctgtatccacccact 620
Query: 421 cactaccctcccacattgtttatacttttttatagttacattttttgctttgttgaggca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cactaccctcccacattgtttatacttttttatagttacattttttgctttgttgaggca 680
Query: 481 aaacttacttcagtgtaatgaactaattttggctgcattattttgaccaatgaagatcac 540
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 681 aaacttacttcagtgtaatgaactaattttggctgcattattttgacaaatgaagatcac 740
Query: 541 attgctatcacagaacaccttcccctcctcagaaagttccttcaagttctgctttgtcaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 attgctatcacagaacaccttcccctcctcagaaagttccttcaagttctgctttgtcaa 800
Query: 601 cacctccctagttctccaacc 621
|||||||||||||||||||||
Sbjct: 801 cacctccctagttctccaacc 821
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1021
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1011
Effective search space: 617721
Effective search space used: 617721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no307_b11.g1 MSMg01no307_b11.g1 CHROMAT_FILE:
MSMg01no307_b11.g1 PHD_FILE: MSMg01no307_b11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:03 2005
(287 letters)
>mm_chr11_81744552_81745238
Length = 687
Score = 503 bits (260), Expect = e-147
Identities = 273/278 (98%), Gaps = 2/278 (0%)
Strand = Plus / Minus
Query: 1 tcctggcacccagacccatgtaaggaggaagtgcaaatgtcaaatggcttacattctggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tcctggcacccagacccatgtaaggaggaagtgcaaatgtcaaatggcttacattctggc 390
Query: 61 ttagtgaggccacactagaaagaagacattcttgcttgctcagtctctcatgacactcat 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 389 ttagtgaggccacactagaaagacgacattcttgcttgctcagtctctcatgacactcat 330
Query: 121 tgtagtgctatgcaaagagggcttgttcccagtctcagacaagaaaccaaggctgggggt 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 329 tgtagtgctatgcaaagagggcttgttccctgtctcagacaagaaaccaaggctgggggt 270
Query: 181 aacttagggcagggtcagtttatggtaatgactatcatggtggaaagggcatgtcacatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 aacttagggcagggtcagtttatggtaatgactatcatggtggaaagggcatgtcacatc 210
Query: 241 atgacaactaggaaggagagggag--gagggagggagg 276
||||||||||||||| |||||||| ||||||||||||
Sbjct: 209 atgacaactaggaagtagagggagaggagggagggagg 172
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
