Query= MSMg01no308_c23.b1 MSMg01no308_c23.b1 CHROMAT_FILE:
MSMg01no308_c23.b1 PHD_FILE: MSMg01no308_c23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:49:26 2005
(180 letters)
>mm_chr11_8703555_8704136
Length = 582
Score = 321 bits (166), Expect = 1e-92
Identities = 178/182 (97%), Gaps = 2/182 (1%)
Strand = Plus / Plus
Query: 1 ggcacatca-gcctcatctatgtagg-atggtgacaggtgatagagccaggctttgtcta 58
||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 ggcacatcaagcctcatctacgtaggcatggtgacaggtgatagagccaggctttgtcta 260
Query: 59 gaaagggaagactcaactgtggcaatttgaaataatgtgtttccttggaataaattctta 118
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaagggaagactcaactgtggcaacttgaaataatgtgtttccttggaataaattctta 320
Query: 119 tgggatacattgttctctagatggattttgctattacttaagagaacccttgacgtttgt 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgggatacattgttctctagatggattttgctattacttaagagaacccttgacgtttgt 380
Query: 179 ga 180
||
Sbjct: 381 ga 382
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 180
Length of database: 582
Length adjustment: 8
Effective length of query: 172
Effective length of database: 574
Effective search space: 98728
Effective search space used: 98728
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no308_c23.g1 MSMg01no308_c23.g1 CHROMAT_FILE:
MSMg01no308_c23.g1 PHD_FILE: MSMg01no308_c23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:49:26 2005
(346 letters)
>mm_chr11_8873500_8874245
Length = 746
Score = 632 bits (327), Expect = 0.0
Identities = 342/347 (98%), Gaps = 2/347 (0%)
Strand = Plus / Minus
Query: 1 agacctcagcctgcctgcctgtgtggcttaggggataagcacagaacaggcaaaggaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 agacctcagcctgcctgcctgtgtggcttaggggataagcacagaacaggcaaaggaggg 487
Query: 61 aaatgtggggaccctcgcatgtccacaggaatgttctcctgccttgaagggctcccatct 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 486 aaatgtggggaccctcgcatgtccacaggagtgttctcctgccttgaagggctcccatct 427
Query: 121 ctattcacatttctagttgcctaagtgcccatcatcagggtcctcctgcaacagtttcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ctattcacatttctagttgcctaagtgcccatcatcagggtcctcctgcaacagtttcca 367
Query: 181 gcaagccagtgatggaagtcctgtgttcttgggagccagaggctcagaagtacagacttt 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gcaagccagtgaaggaagtcctgtgttcttgggagccagaggctcagaagtacagacttt 307
Query: 241 ccagcccccagctcccagtacaaggagctacgcgtggggaggggaaactggtggctgtgg 300
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 306 ccagcccccagctcccagtacaaggagctacacgtggggaggggaaactggtggctgtgg 247
Query: 301 gtcaggatagcattgtataaaaacagcaggcag-tgattcatgaaaa 346
|||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 246 gtcaggatagcattgtataaaaacagcagg-aggtgattcatgaaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
