CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAAGAGGATCCGCGG
AATTCATGGATTGACCGCAGGTGAGGTTATTTGTTTTCAATGAGCCATTT
AATATCATGGAGGGGTTTTGTCACTTCTAATTAATTTCTGCCCTCAGCTG
GCCGATTGATTAATAACCCATGGGGAATGAGCCGCCAGCCACTTTCCCCT
CCCAGGTAATTACTACCCAAGTAAGAACGCCACATTCAAAATCACTAAAA
CCGTATTAAACATCATTAAAGCCATATCAAGTGCGAGCAAATGATGATGG
CAAGGAATGGTCCGACAAGTTCTAGTTCCTATTGATTAATTAGTAAAATT
TATGTCACAAGCATTGCAAACCTATCTTTAAAAAAAATAATCGAGAAAAA
GAGCTGTGATTTTTACCCCCCCTACTTCAACTATCCAAACAGATTTTTTT
TTCTTTTTGGTCAGCAGAATATAATATAAGCCTGTGCAAGAGGACTGCTA
TATTTAACTCAGACAAACACATAACAAATCACTATTCCGTAGTGCGAAGG
CACACCTCACAGGCTCCGTTTTCTTCCTTTTTTTCCTTTCTCTCTCTCTC
TCTCCCTCTTTTTTTTCTTTCCTGGGGCCTGGATATAAGACCACAGCCAT
CTAAATAATCCTCCAGAAATAAACCAATGAAATCGTGAGTCCTACAACAG
ACAGGGTATTATACCTGCTGCTGGTAAN

GGGGGGGGGANNNACAAAANAGGGNCGGGGGGGCCNCACNNNNNCCAAAA
AAAAAGGGGGGGGGGNAGGGGGCTNCTTCAAAAGGGGGGGGNNNCCNAGG
GGATTNACAAAAAAAGGGGGNNNNGGGGGGGNNNNNNNNNNNNNNGNNNN
NNNGGGTTGCGGCAAAAAAAGGGGGGGGGGNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNGGGGGNNGGGGGNNNGGGNGANGGGAGGANGGGGGGGG
GGGANAAAAGGGGGGGGGGGGGGGGGGGAGGGAGAGGGGGTTTTTGGAGG
GGGGGGGGGAGGGAGGGGGAGGGGGGGGGAAGAGGGAAAAAGGGGAGGAG
AGAGGATTTTGGTGGTTTGGGAAGGGAAGGGGGGAGGAGAGAGAGGGATA
GGGGTGGGTTCCCCAAAACCGGGCGCCCGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGNNNNCCCCAAAAAAAAAAAACNNNNAAAAGGGNNNCCCGCCC
CCCGGGGCNCCCCNNNNCNCCCNCNNCCCCCCNCCCCCNNCCCNNCCCCN
CNNNNCCCCCCCCCCNCCNNCCNNNCCCCCNCCCCCCCCCCCCCCCCCCC
CNCCNNCNCNCGCCCCCCNNCCCCNNCGCCCCCNCCNCCNCCNCCCCNNC
CCCCCCCCCNNCNCCCCCCCCCCCCCNCNCCCNNCCCCCCCCCCNNNCNC
CCCCCGCCGCNNNCCNCCCCCCNCCCCCCCCCCTTTTTTTTTTTTTTTNC
CCCNNCGGGGGGGGGGCGCGGGGGGGGGGGGTGGCGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGG

Query= MSMg01no308_e22.b1 MSMg01no308_e22.b1 CHROMAT_FILE:
MSMg01no308_e22.b1 PHD_FILE: MSMg01no308_e22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:49:36 2005
         (579 letters)



>mm_chr11_111546968_111547947
          Length = 980

 Score = 1048 bits (542), Expect = 0.0
 Identities = 570/586 (97%), Gaps = 13/586 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtgaggttatttgttttcaatgagccatttaatatcatggaggggttttgtcacttctaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 201 gtgaggttatttgttttcaatgagccatttaatatcatggaggggttttgtaatttctaa 260

                                                                       
Query: 61  ttaatttctgccctcagctggccgattgattaataacccatggggaatgagccgccagcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaatttctgccctcagctggccgattgattaataacccatggggaatgagccgccagcc 320

                                                                       
Query: 121 actttcccctcccaggtaattactacccaagtaagaacgccacattcaaaatcactaaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actttcccctcccaggtaattactacccaagtaagaacgccacattcaaaatcactaaaa 380

                                                                       
Query: 181 ccgtattaaacatcattaaagccatatcaagtgcgagcaaatgatgatggcaaggaatgg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccgtattaaacatcattaaagccatatcaagtgcgagcaaatgatgatggcaaggaatgg 440

                                                                       
Query: 241 tccgacaagttctagttcctattgattaattagtaaaatttatgtcacaagcattgcaaa 300
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tccgacaagttccagttcctattgattaattagtaaaatttatgtcacaagcattgcaaa 500

                                                                       
Query: 301 cctatctttaaaaaaaataatcgagaaaaagagctgtgattttta------cccccccta 354
           |||||||||||||||||||||||||||||||||||||||||||||      |      ||
Sbjct: 501 cctatctttaaaaaaaataatcgagaaaaagagctgtgatttttattgaagc------ta 554

                                                                       
Query: 355 cttcaactatccaaacagattttttttt-ctttttggtcagcagaatataatataagcct 413
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 555 cttcaactatccaaacagattttttttttctttttggtcagcagaatataatataagcct 614

                                                                       
Query: 414 gtgcaagaggactgctatatttaactcagacaaacacataacaaatcactattccgtagt 473
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 gtgcaagaggactgctatatttaactcagacaaacacataacaaatcactattccgtagt 674

                                                                       
Query: 474 gcgaaggcacacctcacaggctccgttttcttcctttttttcctttctctctctctctct 533
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 gcgaaggcacacctcacaggctccgttttcttcctttttttcctttctctctctctctct 734

                                                         
Query: 534 ccctcttttttttctttcctggggcctggatataagaccacagcca 579
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 ccctcttttttttctttcctggggcctggatataagaccacagcca 780


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 980
Length adjustment: 10
Effective length of query: 569
Effective length of database: 970
Effective search space:   551930
Effective search space used:   551930
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)