Query= MSMg01no309_d09.b1 MSMg01no309_d09.b1 CHROMAT_FILE:
MSMg01no309_d09.b1 PHD_FILE: MSMg01no309_d09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:44 2005
(251 letters)
>mm_chr11_81790899_81791549
Length = 651
Score = 470 bits (243), Expect = e-137
Identities = 249/251 (99%)
Strand = Plus / Minus
Query: 1 aagactgaaacagatcaacccttcccagcccttccttgatgtatggccttggacctaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 aagactgaaacagatcaacccttcccagcccttccttgatgtatggccttggacctaggg 392
Query: 61 tttaatctacttgcacctcaattagagaagagacagctgtgtactccgaataataattat 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 391 tttaatctacttgcacctcaattagagaagagacagctgtgtactacgaataataattat 332
Query: 121 atgcccagccctaggctaggtgcatccctcagtggtttccagctggtggtgatgctgcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 atgcccagccctaggctaggtgcatccctcagtggtttccagctggtggtgatgctgcct 272
Query: 181 ccagggaaattttttttattggtaccactgaggcaatgaggtgtgagtactgttgtcatg 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 271 ccagggaaattttttttattggtacaactgaggcaatgaggtgtgagtactgttgtcatg 212
Query: 241 aggggtgctgt 251
|||||||||||
Sbjct: 211 aggggtgctgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no309_d09.g1 MSMg01no309_d09.g1 CHROMAT_FILE:
MSMg01no309_d09.g1 PHD_FILE: MSMg01no309_d09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:44 2005
(287 letters)
>mm_chr11_81631650_81632335
Length = 686
Score = 381 bits (197), Expect = e-110
Identities = 250/277 (90%), Gaps = 19/277 (6%)
Strand = Plus / Plus
Query: 1 atgcatg-agattggcatctagtgaagtggaggccaggaaagatgctaccctataatcta 59
||||||| | |||||||||||||||||||||||||| |||||||||||| ||||||| ||
Sbjct: 201 atgcatgca-attggcatctagtgaagtggaggcca-gaaagatgctactctataatgta 258
Query: 60 tgagagactccttccaccatgggtacccctgactcattgggggccagatctgagccttgt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tgagagactccttccaccatgggtacccctgactcattgggggccagatctgagccttgt 318
Query: 120 ccttattgtcaaacaatgatgctccctgggacttcagttataaaagcaatctcgctcttt 179
|||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 319 ccttat----------tgatgctcactgggacttcagttataaaagcaatctcgctcttt 368
Query: 180 cttccctattctggtaaggacactcagacagacagacagacagacagacagacagacaga 239
|||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||| |
Sbjct: 369 cttccctattctagtaaggatactcagacagacagacagacagacagacagacacacaca 428
Query: 240 cagacagattctcacacacacacacacacacacacac 276
|| ||| |||||||||||||||||||||||||
Sbjct: 429 cacaca------cacacacacacacacacacacacac 459
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 686
Length adjustment: 9
Effective length of query: 278
Effective length of database: 677
Effective search space: 188206
Effective search space used: 188206
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
