Query= MSMg01no311_a12.b1 MSMg01no311_a12.b1 CHROMAT_FILE:
MSMg01no311_a12.b1 PHD_FILE: MSMg01no311_a12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:51:46 2005
(558 letters)
>mm_chr11_42098168_42099125
Length = 958
Score = 569 bits (294), Expect = e-166
Identities = 318/326 (97%), Gaps = 1/326 (0%)
Strand = Plus / Minus
Query: 234 cttcaatcttggacctacaactgacactaaggctgcacattgactatgagtggtctctcc 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 958 cttcaatcttggacctacaactgacactaaggctgcacattgactatgagtggtctctcc 899
Query: 294 cagtccctcaaagttccaagcctcagctattctccatgaccctttcatgctttc-aaatc 352
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 898 cagtccctcaaagttccaagcctcagctattctccatgaccctttcatgctttcaaaatc 839
Query: 353 agcaagatctaggcgaccgacttcagctaccagtaagaggtacaatcttggttgcctttg 412
||||||||||||| ||| || |||||||||||||||||||||||||||||||||||| ||
Sbjct: 838 agcaagatctaggtgactgagttcagctaccagtaagaggtacaatcttggttgcctctg 779
Query: 413 gaatatagcatctgtgttcttttcctctctctgtgcaacatgtgaagcagtactgggact 472
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 778 gaatatagcatctgtgttcttttcctctctctgtgcaacatgtgaagcagtagtggggct 719
Query: 473 aagaggttctatgggtcttagtcaagctggaaaagccagaagtgttatagctcttaagag 532
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 718 aagaggttctatgggtcttagtcaagctggaaaagcccgaagtgttatagctcttaagag 659
Query: 533 aagtgaggggatttgggcagcctgca 558
||||||||||||||||||||||||||
Sbjct: 658 aagtgaggggatttgggcagcctgca 633
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 958
Length adjustment: 10
Effective length of query: 548
Effective length of database: 948
Effective search space: 519504
Effective search space used: 519504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no311_a12.g1 MSMg01no311_a12.g1 CHROMAT_FILE:
MSMg01no311_a12.g1 PHD_FILE: MSMg01no311_a12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:51:46 2005
(289 letters)
>mm_chr11_41940269_41940957
Length = 689
Score = 543 bits (281), Expect = e-159
Identities = 287/289 (99%)
Strand = Plus / Plus
Query: 1 tctgccatgaacagcaaaatgtatatgccttcccccacagatcttccccattccttcccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgccatgaacagcaaaatgtatatgccttcccccacagatcttccccattccttcccc 260
Query: 61 ctttcctcatacacatgcttcaagttctaaactaaaaccaatgcgtgggtaacataatgc 120
|||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 ctttcctcatacacatgctttaagttctaaactaaaaccaatgagtgggtaacataatgc 320
Query: 121 tgttgatctcacctgtgaattgctcagtatcccattagccagtagtgtctgggaaaatac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgttgatctcacctgtgaattgctcagtatcccattagccagtagtgtctgggaaaatac 380
Query: 181 aaatcattagcttcatcaggagttactgaattggaaactgtaagttatacaggacatcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaatcattagcttcatcaggagttactgaattggaaactgtaagttatacaggacatcaa 440
Query: 241 ttctaagaagtccttctgggcagctacaaatgtgatggccacttggaga 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttctaagaagtccttctgggcagctacaaatgtgatggccacttggaga 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
