Query= MSMg01no311_l15.b1 MSMg01no311_l15.b1 CHROMAT_FILE:
MSMg01no311_l15.b1 PHD_FILE: MSMg01no311_l15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:52:39 2005
(317 letters)
>mm_chr11_66001898_66002614
Length = 717
Score = 561 bits (290), Expect = e-164
Identities = 308/314 (98%)
Strand = Plus / Minus
Query: 4 ggaattccactgagaaaattctcaagtcctgtactcactccatccccacaccccaggaat 63
|||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 484 ggaattccactgagaaaattctcaagtcatgtgctcactccatccccacaccccaggaat 425
Query: 64 gtctttggcagccttcccaactctcagagctcactctctagaactcccactgacagcttc 123
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gcctttggcagccttcccaactctcagagctcactctctagaactcccactgacagcttc 365
Query: 124 tcaaactgcagctcaataaatagtgcctagagtttcctctactggtgctactggtactcc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tcaaactgcagctcaataaatagtgcctagagtttcctctactggtgctactggtactcc 305
Query: 184 cagatctcttcttaattccacacagatttcttcctctgcctgcttcagcactataggtca 243
||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 304 cagatctcttcttaattccacacagatttctacctctgcctgtttcagcactataggtca 245
Query: 244 tgggagggaacaagacaaaattccccctattattttatatttctgtatcagtcagagttc 303
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 244 tgggagggaacaagacaaaattccccctattattttatattcctgtatcagtcagagttc 185
Query: 304 cctagagaaacaaa 317
||||||||||||||
Sbjct: 184 cctagagaaacaaa 171
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no311_l15.g1 MSMg01no311_l15.g1 CHROMAT_FILE:
MSMg01no311_l15.g1 PHD_FILE: MSMg01no311_l15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:52:40 2005
(288 letters)
>mm_chr11_65845344_65846035
Length = 692
Score = 542 bits (280), Expect = e-158
Identities = 286/290 (98%), Gaps = 4/290 (1%)
Strand = Plus / Plus
Query: 1 aatatgtttctctgaagttagctgaattttaaacttttaaaactattccatgaacctagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatatgtttctctgaagttagctgaattttaaacttttaaaactattccatgaacctagc 260
Query: 61 aagaaagaaatattttctatttatggaatgcaaagttgaaaactatgtatcatttttaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagaaagaaatattttctatttatggaatgcaaagttgaaaactatgtatcatttttaat 320
Query: 121 tcagtgatatattgaggattcttctgtgtgtacacttccttttctctctatggattttga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcagtgatatattgaggattcttctgtgtgtacacttccttttctctctatggattttga 380
Query: 181 aaaggggtatagaaaatagcacactatatttttagcaaattctaaaaaaaaaaaa----c 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 aaaggggtatagaaaatagcacactatatttttagcaaattctaaaaaaaaaaaaaaaac 440
Query: 237 tctaaagggctatatgccatttgccttgaaattgtcctatttactgatta 286
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctaaagggctatatgccatttgccttgaaattgtcctatttactgatta 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 692
Length adjustment: 9
Effective length of query: 279
Effective length of database: 683
Effective search space: 190557
Effective search space used: 190557
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
