Query= MSMg01no312_k21.b1 MSMg01no312_k21.b1 CHROMAT_FILE:
MSMg01no312_k21.b1 PHD_FILE: MSMg01no312_k21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:48 2005
(231 letters)
>mm_chr11_55704533_55705163
Length = 631
Score = 447 bits (231), Expect = e-130
Identities = 231/231 (100%)
Strand = Plus / Minus
Query: 1 gagagtaagtgttcacattcaattcagtttggaaatgttaattaaggctcagctgcaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gagagtaagtgttcacattcaattcagtttggaaatgttaattaaggctcagctgcaagg 372
Query: 61 ggttcattcatttatgtgtactcagagcttagtcttaatcccctactaatactctgtgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ggttcattcatttatgtgtactcagagcttagtcttaatcccctactaatactctgtgtg 312
Query: 121 ggaggaacaagagcatgggggacgtgaaagaggagaaaggccagagcaaatggagaggct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ggaggaacaagagcatgggggacgtgaaagaggagaaaggccagagcaaatggagaggct 252
Query: 181 tcgctaaccactcctacccatgaatgtggcaatgaggccagagaatgtggg 231
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tcgctaaccactcctacccatgaatgtggcaatgaggccagagaatgtggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 231
Length of database: 631
Length adjustment: 9
Effective length of query: 222
Effective length of database: 622
Effective search space: 138084
Effective search space used: 138084
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no312_k21.g1 MSMg01no312_k21.g1 CHROMAT_FILE:
MSMg01no312_k21.g1 PHD_FILE: MSMg01no312_k21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:49 2005
(307 letters)
>mm_chr11_55535851_55536560
Length = 710
Score = 569 bits (294), Expect = e-166
Identities = 305/310 (98%), Gaps = 3/310 (0%)
Strand = Plus / Plus
Query: 1 tgggatactcatgattctaagttcatatctctactttagagccacctttgtacaccactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgggatactcatgattctaagttcatatctctactttagagccacctttgtacaccactt 260
Query: 61 cattggttttttttttt---ccttttgactttaggaacatatctatgagtcccatcatga 117
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cattggttttttttttttttccttttgactttaggaacatatctatgagtcccatcatga 320
Query: 118 cctggcctctgactctctaaggctcattttccaccgtgctgtctctgcattttctttgct 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctggcctctgactctctaaggctcattttccaccgtgctgtctctgcattttctttgct 380
Query: 178 caaccttgcttttcagttagttctctgtgacacatgatctaatcaagttatcaaaggaga 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaccttgcttttcagttagttctctgtgacacatgatctaatcaagttatcaaaggaga 440
Query: 238 tattgacgtttgttcttgatttcagaggtttcagcccgtggttgcttggctggttctgtg 297
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tattgacgtttgttcatgacttcagaggtttcagcccgtggttgcttggctggttctgtg 500
Query: 298 tcctgcagaa 307
||||||||||
Sbjct: 501 tcctgcagaa 510
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 307
Length of database: 710
Length adjustment: 9
Effective length of query: 298
Effective length of database: 701
Effective search space: 208898
Effective search space used: 208898
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
