Query= MSMg01no313_k15.b1 MSMg01no313_k15.b1 CHROMAT_FILE:
MSMg01no313_k15.b1 PHD_FILE: MSMg01no313_k15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:55:37 2005
(417 letters)
>mm_chr11_63445261_63446081
Length = 821
Score = 600 bits (310), Expect = e-176
Identities = 324/330 (98%), Gaps = 4/330 (1%)
Strand = Plus / Minus
Query: 11 ggaattc-aaagagcagagag---gcagcagacgcttcaaccacaagatgctttcaaata 66
||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 348 ggaattcaaaagagcagagaggcagcagcagacgtttcaaccacaagatgctttcaaata 289
Query: 67 aagctgaattacctcgacagtaaccattcctggtctgttcagcaatatatatattttctc 126
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 288 aagctgaattacctcgacagtaaccattcctggtctgttcagcaatatatacattttctc 229
Query: 127 ttgaaggatcttctaaggcagtggttctcaacctgtggattatgacctcttgtgggggag 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 ttgaaggatcttctaaggcagtggttctcaacctgtggattatgacctcttgtgggggag 169
Query: 187 aggggtgtcaaatgaccctttcacaggggtcacctaagaccaccagaaagcatagatatt 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 aggggtgtcaaatgaccctttcacaggggtcacctaagaccaccagaaagcatagatatt 109
Query: 247 tacattatgattcataatgatggcaaaattacaattatgaagtagcaacgaaaataactt 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 tacattatgattcataatgatggcaaaattacaattatgaagtagcaacgaaaataactt 49
Query: 307 catggttggggctcagcacagcatgaggaa 336
||||||||||||||||||||||||||||||
Sbjct: 48 catggttggggctcagcacagcatgaggaa 19
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 821
Length adjustment: 9
Effective length of query: 408
Effective length of database: 812
Effective search space: 331296
Effective search space used: 331296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no313_k15.g1 MSMg01no313_k15.g1 CHROMAT_FILE:
MSMg01no313_k15.g1 PHD_FILE: MSMg01no313_k15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:55:37 2005
(379 letters)
>mm_chr11_63392379_63393157
Length = 779
Score = 687 bits (355), Expect = 0.0
Identities = 373/379 (98%)
Strand = Plus / Plus
Query: 1 tgtggcgccatgcctgtggcttccttctgagaaactccatctgaagtatcctcccaggaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 tgtggcgccatgcctgtggcttccttctgagaaactccatctgaagtatcctcctaggaa 260
Query: 61 ccagggtaacctagaacttagaggtcagacgggagatggattggggttcccagactccac 120
|||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccagggaaacctagaacttagaagtcagacgggagatggattggggttcccagactccac 320
Query: 121 ccaacccatgagaactagctagcacaccacatatttgggagcaatgaggtcaccattttc 180
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 ccaacccatgagaaccagctagcacaccacatacttgggagcaatgaggtcaccattttc 380
Query: 181 ctgtaaagacttgcctttaaaatatgcatacttattaattaaaatgtaaatatgccactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgtaaagacttgcctttaaaatatgcatacttattaattaaaatgtaaatatgccactt 440
Query: 241 cctttttctccctctgacccattccccaaataaaattttaagttgacatgtaatatctca 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cccttttctccctctgacccattccccaaataaaattttaagttgacatgtaatatctca 500
Query: 301 ttttcaatcatgtgaaagatgatatttagaagtatgtggatgagttgggacagttagatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttttcaatcatgtgaaagatgatatttagaagtatgtggatgagttgggacagttagatc 560
Query: 361 tcacccgtcagcagatgct 379
|||||||||||||||||||
Sbjct: 561 tcacccgtcagcagatgct 579
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 379
Length of database: 779
Length adjustment: 9
Effective length of query: 370
Effective length of database: 770
Effective search space: 284900
Effective search space used: 284900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
