Query= MSMg01no313_l02.b1 MSMg01no313_l02.b1 CHROMAT_FILE:
MSMg01no313_l02.b1 PHD_FILE: MSMg01no313_l02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:55:41 2005
(328 letters)
>mm_chr11_41868944_41869671
Length = 728
Score = 588 bits (304), Expect = e-172
Identities = 322/328 (98%)
Strand = Plus / Minus
Query: 1 acactgcagggcaccccgttgatcaatcatcctgttggataatattaccttaagacattt 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 acactgccgggcaccccgttgatcaatcatcctgttggataatattaccttaagacattt 469
Query: 61 ctaaagttaatactgcattaatatctgtctttacaccaagaaacaagccttctctaatgt 120
||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 468 ataaagttaatagtgcattaatatctgtctttacaccaaaaaacaagccttctctaatgt 409
Query: 121 caattagctaagggtgtttctactgtatccccacaactcaagttgcgaaggacatattgg 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 caattagctaagggtgcttctactgtatccccacaactcaagttgcgaaggacatattgg 349
Query: 181 aagggcacatcaatgcctctgagggccaaatcttcacatccacccgcacgtgtacccaat 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 348 aagggcacatcaatgcctctgagggccaaatcttcacatccacccgcatgtgtacccaat 289
Query: 241 aaaaaaggaacacagacaaacaagaagcagagaatgccagatgaagttcaaaactgtctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 aaaaaaggaacacagacaaacaagaagcagagaatgccagatgaagttcaaaactgtctt 229
Query: 301 gcccttgagtcactacacagcactatta 328
||||||||||||||||||||||||||||
Sbjct: 228 gcccttgagtcactacacagcactatta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 328
Length of database: 728
Length adjustment: 9
Effective length of query: 319
Effective length of database: 719
Effective search space: 229361
Effective search space used: 229361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no313_l02.g1 MSMg01no313_l02.g1 CHROMAT_FILE:
MSMg01no313_l02.g1 PHD_FILE: MSMg01no313_l02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:55:41 2005
(375 letters)
>mm_chr11_41701636_41702409
Length = 774
Score = 669 bits (346), Expect = 0.0
Identities = 367/374 (98%), Gaps = 1/374 (0%)
Strand = Plus / Plus
Query: 1 tttggcagctgaattactgtatttgcatgagttataattccagatcacaaagttcattca 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttggcagctaaattactgtatttgcatgagttataattccagatcacaaagttcattca 260
Query: 61 atgtattgtgaaaaagatgaacaagcagacttgtaagcagaagtacccctgtgtttattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 atgtattgtgaaaaagatgaacaagcagacttgtaagcagaagtacccctgtgcttattt 320
Query: 121 ttctacagttgttaatatatccaggtttattagtaagaaatgaagatgtatatgtgaagt 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 ttctaccgttgttaatatatccaggtttattagtaagaaatgaagatgtatatgtgaggt 380
Query: 181 taaatgtaaaaagcaacagcattaactgtgatgaaagcatttgagatgtgatttcactcc 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taaatataaaaagcaacagcattaactgtgatgaaagcatttgagatgtgatttcactcc 440
Query: 241 tgtactcttctctgtaatggctatactcaatggaattatatttaatcaacagtttgatgg 300
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 441 tgtactcttctctgtaatggctatactcagtggaattatatttaatcaacagtttgatgg 500
Query: 301 cttggaccgtctgatattgcattatttgtactagaacaaattcagtcatattccagtact 360
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 501 cttggaccgtctgatattgcattatttgtactagaa-aaattcagtcatattccagtact 559
Query: 361 gagcctttggtgca 374
||||||||||||||
Sbjct: 560 gagcctttggtgca 573
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 774
Length adjustment: 9
Effective length of query: 366
Effective length of database: 765
Effective search space: 279990
Effective search space used: 279990
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
