Query= MSMg01no315_p16.b1 MSMg01no315_p16.b1 CHROMAT_FILE:
MSMg01no315_p16.b1 PHD_FILE: MSMg01no315_p16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:36 2005
(369 letters)
>mm_chr11_24188780_24189550
Length = 771
Score = 661 bits (342), Expect = 0.0
Identities = 361/368 (98%), Gaps = 4/368 (1%)
Strand = Plus / Minus
Query: 5 gaattctttatgttcgcggagaaacctcaagctgacttctttcactgttgtttgagtttg 64
|||||||||||| | | || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 gaattctttatgat-gaggggaaacctcaagctgacttctttcactgttgtttgagtttg 513
Query: 65 atcaagctctgggagtcaagaagtctaatggtccatggtgtggcctgacacctttgaagc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 atcaagctctgggagtcaagaagtctaatggtccatggtgtggcctgacacctttgaagc 453
Query: 125 aaataaataaggtcttatggagcctcccccacacttctcctgtgtaggttttcattcaag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 aaataaataaggtcttatggagcctcccccacacttctcctgtgtaggttttcattcaag 393
Query: 185 ggatatgccattagttgactccaccacaagcatgatacccactttcaatcccaaactctt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 ggatatgccattagttgactccaccacaagcatgatacccactttcaatcccaaactctt 333
Query: 245 agtgtttcaccaatgataattaatgtaacccctcctccttttaaagcctgcatctccaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 agtgtttcaccaatgataattaatgtaacccctcctccttttaaagcctgcatctccaaa 273
Query: 305 actttcattctacagcactaatttgtgatttttt--aaaaaaaaatgttttttt-gctgg 361
|||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 272 actttcattctacagcactaatttgtgattttttttaaaaaaaaatgttttttttgctgg 213
Query: 362 cagctaga 369
||||||||
Sbjct: 212 cagctaga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 771
Length adjustment: 9
Effective length of query: 360
Effective length of database: 762
Effective search space: 274320
Effective search space used: 274320
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no315_p16.g1 MSMg01no315_p16.g1 CHROMAT_FILE:
MSMg01no315_p16.g1 PHD_FILE: MSMg01no315_p16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:37 2005
(242 letters)
>mm_chr11_24042310_24042951
Length = 642
Score = 435 bits (225), Expect = e-126
Identities = 237/241 (98%)
Strand = Plus / Plus
Query: 1 tctgacactgtcagagtctggacaaccctgccagctcctggaagggccccccaacaactg 60
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 tctgacactgtcagagtctggacaaccctgccagctcctggaagggcagcccaacaactg 260
Query: 61 tcacaggcaaagcatcagaagcatgagctgtcgatagtgacctgcagtcaaggaaatctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcacaggcaaagcatcagaagcatgagctgtcgatagtgacctgcagtcaaggaaatctg 320
Query: 121 agggcttcctaattaacagaggagctctaaatgagagtaacgcgctccacaaaccccctc 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 321 agggcttcctaattaacagaggagctctaaatgagagtaacgtgctccacaaacctcctc 380
Query: 181 acactcggtaagtgtcacggtgcagataatcattacatctaacaagtgtctggtttcagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acactcggtaagtgtcacggtgcagataatcattacatctaacaagtgtctggtttcagc 440
Query: 241 a 241
|
Sbjct: 441 a 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
