Query= MSMg01no317_j24.b1 MSMg01no317_j24.b1 CHROMAT_FILE:
MSMg01no317_j24.b1 PHD_FILE: MSMg01no317_j24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:39 2005
(295 letters)
>mm_chr11_61852570_61853264
Length = 695
Score = 540 bits (279), Expect = e-158
Identities = 291/295 (98%)
Strand = Plus / Minus
Query: 1 ccacctgaaagatgggcagacgcggaagtctgcctgtatccctagcacaggacccctaag 60
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 686 ccacctgaaagatgggcagacgtggaagtctgcctgtatccctagcacaggacccccaag 627
Query: 61 cttggagagccaaatcagtgagctcaggtttcagtaggagaccttgctctgagtaaataa 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 ctcggagagccaaatcagtgagctcaggtttcagtaggagaccttgctctgagtaaataa 567
Query: 121 agtggaaagaaaccgaggaagactcgaagtcaccctctggactccacaagcacacatgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 agtggaaagaaaccgaggaagactcgaagtcaccctctggactccacaagcacacatgaa 507
Query: 181 ccacacacacataaagacacgcatatacatgcgcacatactacacacatacatactagta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ccacacacacataaagacacgcatatacatgcgcacatactacacacatacatactagta 447
Query: 241 cacatgacaagaaaagtatgtatggagctgctcctcctcagcctgcagagatttt 295
||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 446 cacatgacaagaaaagtatgtatggagctgctcctcctcagccggcagagatttt 392
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 695
Length adjustment: 9
Effective length of query: 286
Effective length of database: 686
Effective search space: 196196
Effective search space used: 196196
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no317_j24.g1 MSMg01no317_j24.g1 CHROMAT_FILE:
MSMg01no317_j24.g1 PHD_FILE: MSMg01no317_j24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:39 2005
(348 letters)
>mm_chr11_61702747_61703494
Length = 748
Score = 658 bits (340), Expect = 0.0
Identities = 343/344 (99%), Gaps = 1/344 (0%)
Strand = Plus / Plus
Query: 1 caggctagtcaagactacatagtgagaccctgtctcaaaataaataagtgaataaataaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggctagtcaagactacatagtgagaccctgtctcaaaataaataagtgaataaataaa 260
Query: 61 acaggtaaaatgtaaacgagatggaatgtgtccagcagacagctgagacctcactatgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaggtaaaatgtaaacgagatggaatgtgtccagcagacagctgagacctcactatgta 320
Query: 121 actatgacatcatcaatctgggacacaggagtggagtgctgatgggaatggtgtgttccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actatgacatcatcaatctgggacacaggagtggagtgctgatgggaatggtgtgttccc 380
Query: 181 agtgactattttaattgcttttcatgcattacttcatttatgtccttagtgagttggagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtgactattttaattgcttttcatgcattacttcatttatgtccttagtgagttggagt 440
Query: 241 gttacatctgagtcactagaagactgagtagcatgcctagacacagacagaactgaaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttacatctgagtcactagaagactgagtagcatgcctagacacagacagaactgaaaac 500
Query: 301 tcaagacctccctagccctcctttaaaaaaaaattttttttttt 344
|||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 501 tcaagacctccctagccctcctttaaaaaaaa-ttttttttttt 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 748
Length adjustment: 9
Effective length of query: 339
Effective length of database: 739
Effective search space: 250521
Effective search space used: 250521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
