Query= MSMg01no317_k09.b1 MSMg01no317_k09.b1 CHROMAT_FILE:
MSMg01no317_k09.b1 PHD_FILE: MSMg01no317_k09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:41 2005
(349 letters)
>mm_chr11_85874503_85875250
Length = 748
Score = 659 bits (341), Expect = 0.0
Identities = 347/349 (99%), Gaps = 1/349 (0%)
Strand = Plus / Plus
Query: 1 cttaaaagttaaaatgataacatttatccagtatacaaattattatttacacaaggctta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttaaaagttaaaatgataacatttatccagtatacaaattattatttacacaaggctta 260
Query: 61 acaaaagcccgccagcatcagctaatcccagggagccccccactgcttacaggccctcgt 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 acaaaagcccgccagcatcagctaatcccagggagccccc-actgcttacaggccctcgt 319
Query: 121 gtctattcatgagtttccccagatctaattcacttatacaagttgccagcgctgctctct 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gtctattcaagagtttccccagatctaattcacttatacaagttgccagcgctgctctct 379
Query: 181 tccactggtgtgactccattcaactatgtgtctgtgcaaccttcgactttcacttctgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tccactggtgtgactccattcaactatgtgtctgtgcaaccttcgactttcacttctgcc 439
Query: 241 caaatccagttgcagtttcaaaaagctcttccgctgaaaaacaatctgaactatgacttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 caaatccagttgcagtttcaaaaagctcttccgctgaaaaacaatctgaactatgacttg 499
Query: 301 atctatcagtttcaaccagttcaccgttttcttcgttggtatcgacagg 349
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 atctatcagtttcaaccagttcaccgttttcttcgttggtatcgacagg 548
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 748
Length adjustment: 9
Effective length of query: 340
Effective length of database: 739
Effective search space: 251260
Effective search space used: 251260
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no317_k09.g1 MSMg01no317_k09.g1 CHROMAT_FILE:
MSMg01no317_k09.g1 PHD_FILE: MSMg01no317_k09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:41 2005
(343 letters)
>mm_chr11_86035361_86036105
Length = 745
Score = 547 bits (283), Expect = e-160
Identities = 316/339 (93%), Gaps = 20/339 (5%)
Strand = Plus / Minus
Query: 6 ctctagaagaccaacatatgctcttaagttctgaaccatctctccaacacacacacaaaa 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ctctagaagaccaacatatgctcttaagttctgaaccatctctccaacacacacacaaaa 686
Query: 66 ccgcttatggtggtacattcttgtgatctcagctcttgggagggggtgcaggagaaatca 125
|||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 685 ccgcttatggtggtacattcttgtgatctcagttcttgggagggggtggaggagaaatcg 626
Query: 126 gaagtcctttgctatatagtgagtttgtcgtcatcctgtgctatatagtgagtttgggcc 185
||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 625 gaagtcc------------------tgtcgtcatcctgtgctatatagtgagtttgggcc 584
Query: 186 cagcctgaaatacatgagagcctttttcagaaacaaaaacaaaaagaaaccccaaagttt 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 cagcctgaaatacatgagagcctttttcagaaacaaaaacaaaaagaaaccccaaagttt 524
Query: 246 atttttatacctgctttgcttttttctctctctcttcttcttttatcttcaaaataaca- 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 atttttatacctgctttgcttttttctctctctcttcttcttttatcttcaaaataacat 464
Query: 305 -ttttttttttttttagatacaaaggaccaaataactta 342
||||||||||||||||||||||||||||||||||||||
Sbjct: 463 tttttttttttttttagatacaaaggaccaaataactta 425
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 745
Length adjustment: 9
Effective length of query: 334
Effective length of database: 736
Effective search space: 245824
Effective search space used: 245824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
