Query= MSMg01no318_l20.b1 MSMg01no318_l20.b1 CHROMAT_FILE:
MSMg01no318_l20.b1 PHD_FILE: MSMg01no318_l20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:58 2005
(307 letters)
>mm_chr11_71755136_71755842
Length = 707
Score = 586 bits (303), Expect = e-172
Identities = 306/307 (99%)
Strand = Plus / Plus
Query: 1 tggtaacccttggtggaagtgaaactcaggcctggggcttctcctttccaaacaaaatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggtaacccttggtggaagtgaaactcaggcctggggcttctcctttccaaacaaaatgt 260
Query: 61 tctccaccacttctcatccaatggtgctccaggctctttctgtcagtcacaccagtctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctccaccacttctcatccaatggtgctccaggctctttctgtcagtcacaccagtctgg 320
Query: 121 gagcacactccaccccttctgcacaccatgcacattgtcccaagtctaataaacagccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagcacactccaccccttctgcacaccatgcacattgtcccaagtctaataaacagccat 380
Query: 181 gggcctcaagtagtggtcctcacccagaaacaactcatctcccattttcctctccgtggc 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 381 gggcctcaagtagtggtcctcacccagaaacaactcatctcccatttttctctccgtggc 440
Query: 241 aatcagtctgcagccctcatcatgccaatagtaatggaagcttctcatgggaagtactct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatcagtctgcagccctcatcatgccaatagtaatggaagcttctcatgggaagtactct 500
Query: 301 aactgtc 307
|||||||
Sbjct: 501 aactgtc 507
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 307
Length of database: 707
Length adjustment: 9
Effective length of query: 298
Effective length of database: 698
Effective search space: 208004
Effective search space used: 208004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no318_l20.g1 MSMg01no318_l20.g1 CHROMAT_FILE:
MSMg01no318_l20.g1 PHD_FILE: MSMg01no318_l20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:58 2005
(308 letters)
>mm_chr11_71944927_71945634
Length = 708
Score = 493 bits (255), Expect = e-144
Identities = 288/309 (93%), Gaps = 19/309 (6%)
Strand = Plus / Minus
Query: 1 gggaccagggctgggattctctgcactttggaaagatgccagaagaattgaggcacatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 gggaccagggctgggattctctgcactttggaaagatgccagaagaattgaggcacatgg 454
Query: 61 agaaactcccaggcctagggtaccaggatactgtccctgaatatcttgggaaggccatca 120
||||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 453 agaaactcccaggcctagggtac-------ctgaccctgaatatcttgggaaggccatca 401
Query: 121 cctctgcaaggggacagcagtccccctttgcaatgtcagactccaggacttcctcaaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 cctctgcaaggggacagcagtccccctttgcaatgtcagactccaggacttcctcaaact 341
Query: 181 ctgcctccaggaagccctccaggacttgctgaggtcaggcaacacataggttcacagcgg 240
|||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 340 ctgcctccaggaagccctccaggacttgctgaggtcaggcaa----------cacagcgg 291
Query: 241 ctgacacacaggctgcagctt-gagacccttcccaacctcttggtcgtggccctgctttt 299
|||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 290 ctgacacacaggctgcag-ttcaagacccttcccaacctcttggtcgtggccctgctttt 232
Query: 300 cgcatatga 308
|||||||||
Sbjct: 231 cgcatatga 223
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 308
Length of database: 708
Length adjustment: 9
Effective length of query: 299
Effective length of database: 699
Effective search space: 209001
Effective search space used: 209001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
