Query= MSMg01no322_c15.b1 MSMg01no322_c15.b1 CHROMAT_FILE:
MSMg01no322_c15.b1 PHD_FILE: MSMg01no322_c15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:04 2005
(376 letters)
>mm_chr11_3389560_3390335
Length = 776
Score = 679 bits (351), Expect = 0.0
Identities = 363/367 (98%)
Strand = Plus / Minus
Query: 5 gaattcaggtcctttgaccccggagagcctcctgggaacttttgcagcccaccctaccaa 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 gaattcaggtccaaggaccccggagagcctcctgggaacttttgcagcccaccctaccaa 512
Query: 65 aggatccttcctgctctagagcctcagttcggcccacctgcacggagggtggttggaaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 aggatccttcctgctctagagcctcagttcggcccacctgcacggagggtggttggaaga 452
Query: 125 aggggccccagctgctggtctttagaactctctgggtccctggtgcctagacccaagaac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 aggggccccagctgctggtctttagaactctctgggtccctggtgcctagacccaagaac 392
Query: 185 cgggtaactctactctgtccccgagcctcaggccctctctttctgctgccaacctggcgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 cgggtaactctactctgtccccgagcctcaggccctctctttctgctgccaacctggcgt 332
Query: 245 cacagtcgcagtgagagatggtgtggaagcggatatttcggatgccatagttatactgca 304
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 331 cacagtcgcagtgagagatggtgtggaagcggaaatttcggatgccatagttatactgca 272
Query: 305 agggcgaaatggtttgtgggcactgatcgtgttcccggcagcagaggtcagggccgtgga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 agggcgaaatggtttgtgggcactgatcgtgttcccggcagcagaggtcagggccgtgga 212
Query: 365 acacgcc 371
|||||||
Sbjct: 211 acacgcc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 776
Length adjustment: 9
Effective length of query: 367
Effective length of database: 767
Effective search space: 281489
Effective search space used: 281489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no322_c15.g1 MSMg01no322_c15.g1 CHROMAT_FILE:
MSMg01no322_c15.g1 PHD_FILE: MSMg01no322_c15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:04 2005
(244 letters)
>mm_chr11_3231050_3231699
Length = 650
Score = 437 bits (226), Expect = e-127
Identities = 242/250 (96%), Gaps = 6/250 (2%)
Strand = Plus / Plus
Query: 1 tctcttctactccccagagtcttacccttttaaagtccgtttgctttgtttggcaggcgc 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 tctcttctactccccagagtcttacccttttaaagtccgtttgctttgtgtggcaggcgc 260
Query: 61 acgaacctcccctctccagcctcctcccgtggctctctgctgaggggagtgggagc---- 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acgaacctcccctctccagcctcctcccgtggctctctgctgaggggagtgggagcttaa 320
Query: 117 -ag-tgaggcagagtccctcagctggggtctctattggatcttttgcttccctgaatcaa 174
|| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagatgaggcagagaccctcagctggggtctctattggatcttttgcttccctgaatcaa 380
Query: 175 aggcttttgtggaattctcttgggagctggcggtgtctgttaaactagcagaaagtggct 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggcttttgtggaattctcttgggagctggcggtgtctgttaaactagcagaaagtggct 440
Query: 235 gtattcgtag 244
||||||||||
Sbjct: 441 gtattcgtag 450
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 650
Length adjustment: 9
Effective length of query: 235
Effective length of database: 641
Effective search space: 150635
Effective search space used: 150635
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
