Query= MSMg01no322_n20.b1 MSMg01no322_n20.b1 CHROMAT_FILE:
MSMg01no322_n20.b1 PHD_FILE: MSMg01no322_n20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:55 2005
(315 letters)
>mm_chr11_30207514_30208228
Length = 715
Score = 598 bits (309), Expect = e-175
Identities = 309/309 (100%)
Strand = Plus / Plus
Query: 5 gaattcacgaaaaagttgggagacagaattggctagggctttgtcactgatttctgagaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacgaaaaagttgggagacagaattggctagggctttgtcactgatttctgagaa 264
Query: 65 tacagaatgaatcattttaggattataaggttctggttagataatcaaaatattgaattt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tacagaatgaatcattttaggattataaggttctggttagataatcaaaatattgaattt 324
Query: 125 caatttaggtgtataacataaggttaatcttctgtagtgtaggataattactgtaggata 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 caatttaggtgtataacataaggttaatcttctgtagtgtaggataattactgtaggata 384
Query: 185 ataactacttaccagaagctactcttgtcagtgtcctataagtcatttttcaagagcatc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ataactacttaccagaagctactcttgtcagtgtcctataagtcatttttcaagagcatc 444
Query: 245 ttatagcatctctcagttgaactacaaattcattgtgtttggcttctgtcttctcaccta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttatagcatctctcagttgaactacaaattcattgtgtttggcttctgtcttctcaccta 504
Query: 305 ctgctactg 313
|||||||||
Sbjct: 505 ctgctactg 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no322_n20.g1 MSMg01no322_n20.g1 CHROMAT_FILE:
MSMg01no322_n20.g1 PHD_FILE: MSMg01no322_n20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:55 2005
(286 letters)
>mm_chr11_30368077_30368762
Length = 686
Score = 447 bits (231), Expect = e-130
Identities = 266/279 (95%), Gaps = 4/279 (1%)
Strand = Plus / Minus
Query: 1 actattgaagccactcacgtttaaactaacacactcttgtaacatacatacccctgaacc 60
||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 316 actattgaagctactcacgtttaaactaacacactcttgtaacatatatacccctgaacc 257
Query: 61 catgggcatacgttaacaagacagtcattatgttaactcatagaatttgcaatgaggcca 120
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 catgggcataccttaacaagacagtcattatgttaactcatagaatttgcaatgaggccg 197
Query: 121 ggaggtggtggcgcacgcctttaatcccagcacttgggaggcagaggcaggcggatttct 180
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 196 ggaggtggtggcacacgcctttaatcccagcacttgggaggcagaggcaggtggatttct 137
Query: 181 gagttcaaggccagcctggtctacaaagtgagttccaggacagccagggcgatacagaga 240
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 136 gagttcaaggccagcctggtctacaaagtaagttccaggacagccagggctatacagaga 77
Query: 241 aaccctgtctcgaaaacaaacaaacaaacaacaacaaaa 279
| ||||||||||||||||||||| | |||||||||||
Sbjct: 76 agccctgtctcgaaaacaaacaa-c---caacaacaaaa 42
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
