Query= MSMg01no323_f15.b1 MSMg01no323_f15.b1 CHROMAT_FILE:
MSMg01no323_f15.b1 PHD_FILE: MSMg01no323_f15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:06:48 2005
(160 letters)
>mm_chr11_78539838_78540398
Length = 561
Score = 288 bits (149), Expect = 1e-82
Identities = 158/161 (98%), Gaps = 1/161 (0%)
Strand = Plus / Minus
Query: 1 aaatcaggcagcagtgaaaaatattcc-ttttttgcctcatagctcctacttccactgtc 59
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 361 aaatcaggcagcagtgaaaaatattcctttttttgcctcatagctcctacttccactgtc 302
Query: 60 ctcttctttcccactctgctagtgggtgagaactctggtgttaaatgcctttcctgagag 119
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 301 ctcttctttcccactctgctagtgggtgagaattctggtgttaaatgcctttcctgagag 242
Query: 120 agaaagcctcagctaggtgggcggttctgaaacaaaaatag 160
||||||||||||||||||||| |||||||||||||||||||
Sbjct: 241 agaaagcctcagctaggtgggtggttctgaaacaaaaatag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 160
Length of database: 561
Length adjustment: 8
Effective length of query: 152
Effective length of database: 553
Effective search space: 84056
Effective search space used: 84056
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no323_f15.g1 MSMg01no323_f15.g1 CHROMAT_FILE:
MSMg01no323_f15.g1 PHD_FILE: MSMg01no323_f15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:06:48 2005
(294 letters)
>mm_chr11_78362361_78363048
Length = 688
Score = 526 bits (272), Expect = e-154
Identities = 286/294 (97%), Gaps = 6/294 (2%)
Strand = Plus / Plus
Query: 1 acaagtgacctcataaaaggcagagagagatgtgaatacagatgaagtggcaatatgacg 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acaagtgaccttataaaaggcagagagagatgtgaatacagatgaagtggcaatatgacg 260
Query: 61 gatgacctgcagagattgcagtgaaagggccacagccaaagaaaggtcagtgggtagact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatgacctgcagagattgcagtgaaagggccacagccaaagaaaggtcagtgggtagact 320
Query: 121 gtgcgcagcaagcctgagtgtgatccgcagctctgcaaacccagccacctggaagaggca 180
||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgcg------gcctgagtgtgatccgcagctctgcaaacccagccacctggaagaggca 374
Query: 181 aggagtgtagtctacctttgagcctgagaccgaatattctaaatttctaacctccgagca 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 375 aggagtgtagtctacctttgagcctgagaccgaacattctaaatttctaacctccgagca 434
Query: 241 gcttaagcataacgttgggggtaaagtaagccactgcgtttgtgacaatgtctt 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gcttaagcataacgttgggggtaaagtaagccactgcgtttgtgacaatgtctt 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 688
Length adjustment: 9
Effective length of query: 285
Effective length of database: 679
Effective search space: 193515
Effective search space used: 193515
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
