Query= MSMg01no324_a15.b1 MSMg01no324_a15.b1 CHROMAT_FILE:
MSMg01no324_a15.b1 PHD_FILE: MSMg01no324_a15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:15 2005
(651 letters)
>mm_chr11_99283494_99284544
Length = 1051
Score = 1191 bits (616), Expect = 0.0
Identities = 643/652 (98%), Gaps = 2/652 (0%)
Strand = Plus / Minus
Query: 1 gacagcctcccattggctgttctgtgatgcaaaaatgcattcctctccatccaccgaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 994 gacagcctcccattggctgttctgtgatgcaaaaatgcattcctctccatccaccgaaat 935
Query: 61 gactctctggcttctgaagcatggagttttaatcatttcttattttggacagtgtttgcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 934 gactctctggcttctgaagcatggagttttaatcatttcttattttggacagtgtttgcg 875
Query: 121 tgtgtgtatgtgtgtgtgtatgtattttgttaatggtggaacactgtaggtgatatacta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 874 tgtgtgtatgtgtgtgtgtatgtattttgttaatggtggaacactgtaggtgatatacta 815
Query: 181 tccattcagccaacaggtttactacaaaattctcacaggtaatgccattgaagaaatagc 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 tccattcagccaacagatttactacaaaattctcacaggtaatgccattgaagaaatagc 755
Query: 241 aataagcattcatcccagagcccagcgtcatggttcactgagaatgcctatcttttgtta 300
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 754 aataagcattcagcccagagcccagcgtcatggttcactgagaatgccaatcttttgtta 695
Query: 301 gctataaatgttcgacttccaaacagctggctcccatgtttaagtgccccattttcagaa 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 694 actataaatgttcgacttccaaacagctggctcccatgtttaagtgttccattttcagaa 635
Query: 361 aagcaagaaccacacaactccttacagcagatgctctcagagccttgcaagctcagattc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 aagcaagaaccacacaactccttacagcagatgctctcagagccttgcaagctcagattc 575
Query: 421 taatgt-ctgcttggaaaacacctctgtttctcaccttccaggaatgcgctcttcatctg 479
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 taatgtcct-cttggaaaacacctctgtttctcaccttccaggaatgcgctcttcatctg 516
Query: 480 cctctgaaactgtccctacagagagaaccacagcatggttggttggcttatactgaaccg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 cctctgaaactgtccctacagagagaaccacagcatggttggttggcttatactgaaccg 456
Query: 540 aaaaaaatagacaggggaggggaagacagagcttcaggaagcatggggcttcggaaggat 599
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 aaagaaatagacaggggaggggaagacagagcttcaggaagcatggggcttcggaaggat 396
Query: 600 tccttaatgctccagtcgtcactcttctggtgtctggaagatacaggcagtg 651
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tccttaatgctccagtcgtcactcttctggtgtctggaagatacaggcagtg 344
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space: 667281
Effective search space used: 667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no324_a15.g1 MSMg01no324_a15.g1 CHROMAT_FILE:
MSMg01no324_a15.g1 PHD_FILE: MSMg01no324_a15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:15 2005
(651 letters)
>mm_chr11_99097084_99098134
Length = 1051
Score = 1210 bits (626), Expect = 0.0
Identities = 644/650 (99%)
Strand = Plus / Plus
Query: 1 tttacacacttttctttgtgttgctatgtgtgtatattcatgactgcctgaaaaatcata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttacacacttttctttgtgttgctatgtgtgtatattcatgactgcctgaaaaatcata 260
Query: 61 gtgtattggaagtgtttgaaatatttgaaaaggaccgctaagactgctcaattgaagtga 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 gtgtattggaagtgtttgaaatatttgaaaaggaccgctaagactgcttaattgaagtga 320
Query: 121 cttttctcacacttagtactattccagagtcaagcacttttacttactgaatggtgccgt 180
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtcttctcacacttagtactattccagagtcaagcacttttacttactgaatggtgccgt 380
Query: 181 gggcctcggcgctctccttcacgtctctgttcactactgcctgtttggtcactgtctcca 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggcctccgcgctctccttcacgtctctgttcactactgcctgtttggtcactgtctcca 440
Query: 241 tattttcattttcatacttttgggagacttttgttgaaaaggagatttcatttataatgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tattttcattttcatacttttgggagacttttgttgaaaaggagatttcatttataatgg 500
Query: 301 ctgtgaaaatgttacatgaagttacaatgatgaaaaaggcaacaaaaataaagtacattt 360
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 501 ctgtgaaaatgttacatgaagttacaatgatgaaaaaggcaagaaaaataaagtacattt 560
Query: 361 tagtgtgtgtggggtgcggagtcacatcatcaacaaactgaacatttctctttttgctgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tagtgtgtgtggggtgcggagtcacatcatcaacaaactgaacatttctctttttgctgc 620
Query: 421 tttggagaaatttctgtatcgtctccaccaataatacatctattttcaaattaggttatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttggagaaatttctgtatcgtctccaccaataatacatctattttcaaattaggttatc 680
Query: 481 atgtcagaaactcacctgaggggagaagaaagcccactttactcttggtaggcttttctt 540
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 681 atgtcagaaactcacctgaggggagaagaaagccaactttactcttggtaggcttttctt 740
Query: 541 cttttttctctccttggatacaaccataatatctgaaatggaaagagtcatagaaacaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cttttttctctccttggatacaaccataatatctgaaatggaaagagtcatagaaacaac 800
Query: 601 actgcggtagcaaaataaaaataaaaacaaacaaacaaaagggaacagat 650
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 actgcggtagcaaaataaaaataaaaacaaacaaacaaaagggaacagat 850
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space: 667281
Effective search space used: 667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
