Query= MSMg01no324_e03.b1 MSMg01no324_e03.b1 CHROMAT_FILE:
MSMg01no324_e03.b1 PHD_FILE: MSMg01no324_e03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:31 2005
(636 letters)
>mm_chr11_11754873_11755907
Length = 1035
Score = 1187 bits (614), Expect = 0.0
Identities = 629/634 (99%), Gaps = 3/634 (0%)
Strand = Plus / Minus
Query: 4 ggaattccagaggtaccgtcaggtcgttaggaccaagggtctcagaggccccggggctag 63
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 ggaattccagagg-actgtcaggtcgttaggaccaagggtctcagaggccccggggctag 617
Query: 64 cacgg-aacactggccagagtgtggggttcaggaatcccaacttccttgggctacacaag 122
|| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 616 catggaaacactggccagagtgtggggttcaggaatcccaacttcctt-ggctacacaag 558
Query: 123 atttgtgacactggtggctgtcaagagctgagaaatccttatactcctgctgcccacaaa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 atttgtgacactggtggctgtcaagagctgagaaatccttatactcctgctgcccacaaa 498
Query: 183 cttcaaccctaattacaagcaagggctgaaaaatgccagctttctaggtttacacaagag 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 cttcaaccctaattacaagcaagggctgaaaaatgccagctttctaggtttacacaagag 438
Query: 243 ctgtagcacgtacagggctcagagtcccaatatgcaaggcatgcatgaagactgtaacac 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ctgtagcacgtacagggctcagagtcccaatatgcaaggcatgcatgaagactgtaacac 378
Query: 303 tagaaggtaccacctgctgctgctcccacctgctcgctgccatcactcaaggctgcaaaa 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tagaaggtaccacctgctgctgctcccacctgctcgctgccatcactcaaggctgcaaaa 318
Query: 363 caccgagggaaacaaaggggcccacaatttgaaggttgtctccttggctacacattattt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 caccgagggaaacaaaggggcccacaatttgaaggttgtctccttggctacacattattt 258
Query: 423 ctgtataaacagaacaaaaggactccagccaactgattcaacaccatgaccagatagatt 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ctgtataaacagaacaaaaggactccagccaactgattcaacaccatgaccagatagatt 198
Query: 483 ttcctcagtgttacattttaggcgctttgtagtttcctacggtatacttaaatctataat 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 ttcctcagtgttacattttaggcgctttgtagtttcctacggtatacttaaatctataat 138
Query: 543 ctattttcagccgagtcttgtgaaaggagtgaaatatgtttagagtcctttgagggtgtg 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 ctattttcagccgagtcttgtgaaaggagtgaaatatgtttagagtcctttgagggtgtg 78
Query: 603 catatgtgagtcttgtgatgggccattgttccag 636
||||||||||||||||||||||||||||||||||
Sbjct: 77 catatgtgagtcttgtgatgggccattgttccag 44
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1035
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1025
Effective search space: 641650
Effective search space used: 641650
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no324_e03.g1 MSMg01no324_e03.g1 CHROMAT_FILE:
MSMg01no324_e03.g1 PHD_FILE: MSMg01no324_e03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:31 2005
(513 letters)
>mm_chr11_11597189_11598101
Length = 913
Score = 992 bits (513), Expect = 0.0
Identities = 513/513 (100%)
Strand = Plus / Plus
Query: 1 taggacacagtacagactgactccagcccttagcttaaaaattatcaagtacctgaaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taggacacagtacagactgactccagcccttagcttaaaaattatcaagtacctgaaact 260
Query: 61 gttgttctgaaacaagggaccctgctggcaaccatactagtcacaagtccagagagggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttgttctgaaacaagggaccctgctggcaaccatactagtcacaagtccagagagggtg 320
Query: 121 gggttgaaagtgtgcatgcaaatctaagggaggtagactgtgtcacaagggtccatatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggttgaaagtgtgcatgcaaatctaagggaggtagactgtgtcacaagggtccatatgc 380
Query: 181 cctggctggcagggaagggagtctgtcgctaagtgacccacagagcagccatgtacagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctggctggcagggaagggagtctgtcgctaagtgacccacagagcagccatgtacagag 440
Query: 241 gtgagctactgggatcctgacatgcacctgtgttaccacagtacccactggaacttgctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgagctactgggatcctgacatgcacctgtgttaccacagtacccactggaacttgctc 500
Query: 301 caagcactgttggtgacctcacttgtctgtccccctgaggcatgacagctggctcctttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caagcactgttggtgacctcacttgtctgtccccctgaggcatgacagctggctcctttg 560
Query: 361 tccatgagatgactgtttggagaagggcaggcactcatactcatgggcctgataaaacat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tccatgagatgactgtttggagaagggcaggcactcatactcatgggcctgataaaacat 620
Query: 421 ttgtttctatttgacttggaagtagcttgggtatattatctgggctatcactgctatcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgtttctatttgacttggaagtagcttgggtatattatctgggctatcactgctatcat 680
Query: 481 ctagtgaaccaagccttcaatgcatagccatta 513
|||||||||||||||||||||||||||||||||
Sbjct: 681 ctagtgaaccaagccttcaatgcatagccatta 713
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 913
Length adjustment: 10
Effective length of query: 503
Effective length of database: 903
Effective search space: 454209
Effective search space used: 454209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
