Query= MSMg01no326_e04.b1 MSMg01no326_e04.b1 CHROMAT_FILE:
MSMg01no326_e04.b1 PHD_FILE: MSMg01no326_e04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:56 2005
(369 letters)
>mm_chr11_106475763_106476531
Length = 769
Score = 690 bits (357), Expect = 0.0
Identities = 363/365 (99%)
Strand = Plus / Plus
Query: 5 gaattcaacttttactcctagtgtcccagacacctgtgtgacccagaagtctttgccctg 64
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaacttctagtcctagtgtcccagacacctgtgtgacccagaagtctttgccctg 264
Query: 65 gatttggaggccagcccttgtattagtcaagtttcactgggagaatagaatggatgtcag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gatttggaggccagcccttgtattagtcaagtttcactgggagaatagaatggatgtcag 324
Query: 125 agatacagaaaacaatggggatttatcagattggcttacacaatacagtcagagaagctc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agatacagaaaacaatggggatttatcagattggcttacacaatacagtcagagaagctc 384
Query: 185 aggccatgaggttggatgaatcagtaggccctgtctttcatcaaagggctgagggattct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aggccatgaggttggatgaatcagtaggccctgtctttcatcaaagggctgagggattct 444
Query: 245 cggtgagaaactggtcttcagtccgtgttgaaaattcaaagacattgggtcctgatgtcg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cggtgagaaactggtcttcagtccgtgttgaaaattcaaagacattgggtcctgatgtcg 504
Query: 305 gtgaaggatcccagcagcagaaagagcattcaccatcaagaggccaagacaggcaggcaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtgaaggatcccagcagcagaaagagcattcaccatcaagaggccaagacaggcaggcaa 564
Query: 365 accgc 369
|||||
Sbjct: 565 accgc 569
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 769
Length adjustment: 9
Effective length of query: 360
Effective length of database: 760
Effective search space: 273600
Effective search space used: 273600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no326_e04.g1 MSMg01no326_e04.g1 CHROMAT_FILE:
MSMg01no326_e04.g1 PHD_FILE: MSMg01no326_e04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:56 2005
(344 letters)
>mm_chr11_106661092_106661835
Length = 744
Score = 594 bits (307), Expect = e-174
Identities = 323/331 (97%), Gaps = 5/331 (1%)
Strand = Plus / Minus
Query: 19 actcagaaccatctcaacaaaagtctagaatgaaaaaagttgtgagccgggcgtggtagc 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 744 actcagaaccatctcaacaaaagtctagaatgaaaaaagttgtgagccgggcgtggtggc 685
Query: 79 gcacgcctttactcccagcacttgggaggcagaggcaggcggatttctgagttcgaggcc 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gcacgcctttactcccagcacttgggaggcagaggcaggcggatttctgagttcgaggcc 625
Query: 139 agcctggtctacaaagtgagttccaggatagccagggctatacagagaaaccctgtctcg 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 agcctggtctacaaagtgagttccaggatagccagggctatacagagaaaccctgtctcg 565
Query: 199 aaaaaccaaaaaaagaaaaaaaaa-----gaaaaagaaaaaagttgtgaaagcagagatt 253
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 564 aaaaaccaaaaaaagaaaaaaaaaaaaaagaaaaagaaaaaagttgtgaaagcagagata 505
Query: 254 ggaaaggaaagtcaagagctcagaaaggcataaaatgttcacatcagcttttggagggac 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ggaaaggaaagtcaagagctcagaaaggcataaaatgttcacatcagcttttggagggac 445
Query: 314 attagagtatgctggacttaatctcgcagag 344
||||||||||||||||||||||||| |||||
Sbjct: 444 attagagtatgctggacttaatctcacagag 414
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
