Query= MSMg01no326_g08.b1 MSMg01no326_g08.b1 CHROMAT_FILE:
MSMg01no326_g08.b1 PHD_FILE: MSMg01no326_g08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:06 2005
(341 letters)
>mm_chr11_59205731_59206471
Length = 741
Score = 594 bits (307), Expect = e-174
Identities = 333/347 (95%), Gaps = 10/347 (2%)
Strand = Plus / Minus
Query: 1 acagagaaaaagaattattccaatccatcaataaagagcatagctagggacccagtggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 acagagaaaaagaattattccaatccatcaataaagagcatagctagggacccagtggag 407
Query: 61 acagactggcagtcacttgttctcctccgggtgccgtgcagagcagaggggaagctgcag 120
|||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 406 acagactggcagtcacctgatctcctcggggtgccgtgcagagcagaggggaagctgcag 347
Query: 121 tcaaacatcaaagagaaacatggggaaaatgaatcacaagttgtaaagggattggaaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 tcaaacatcaaagagaaacatggggaaaatgaatcacaagttgtaaagggattggaaaac 287
Query: 181 agaaaactgaccttcatggaaatggcacatcgctgagaggtctccaaccacgtgtcatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 agaaaactgaccttcatggaaatggcacatcgctgagaggtctccaaccacgtgtcatgt 227
Query: 241 gacatgtcttatgacacctatgatgaacca------catcagcagccagcatgccttggc 294
|||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 226 gacatgtcatatgacacctatgatga----tgtggtcatcagcagccagcatgccttggc 171
Query: 295 ggtcactaacttctccaattggatttacgactttctcaacaagaggg 341
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 ggtcactaacttctccaattggatttacgactttctcaacaagaggg 124
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no326_g08.g1 MSMg01no326_g08.g1 CHROMAT_FILE:
MSMg01no326_g08.g1 PHD_FILE: MSMg01no326_g08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:06 2005
(171 letters)
>mm_chr11_59040441_59041011
Length = 571
Score = 327 bits (169), Expect = 2e-94
Identities = 169/169 (100%)
Strand = Plus / Plus
Query: 1 aattccttcttgatgtgaacagaatccctagcattttgcatttgttctatgtagctagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattccttcttgatgtgaacagaatccctagcattttgcatttgttctatgtagctagac 260
Query: 61 catacaacatatgtagctacctacactacaaactgacatggcacgaccaccctaaatgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catacaacatatgtagctacctacactacaaactgacatggcacgaccaccctaaatgga 320
Query: 121 cagccagaattgtgtactggacctggtctctgtacctgcggactgctca 169
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagccagaattgtgtactggacctggtctctgtacctgcggactgctca 369
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 171
Length of database: 571
Length adjustment: 8
Effective length of query: 163
Effective length of database: 563
Effective search space: 91769
Effective search space used: 91769
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
