Query= MSMg01no327_b08.b1 MSMg01no327_b08.b1 CHROMAT_FILE:
MSMg01no327_b08.b1 PHD_FILE: MSMg01no327_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:55 2005
(378 letters)
>mm_chr11_12827740_12828518
Length = 779
Score = 656 bits (339), Expect = 0.0
Identities = 368/387 (95%), Gaps = 16/387 (4%)
Strand = Plus / Minus
Query: 6 gaattcatcatcattgaactgaatgatctagaaatgaattcatcatcattctgtctactt 65
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gaattcatcatcattgaaatgaatgatctagaaatgaattcatcatcattctgtctactt 358
Query: 66 gtgcatgacag-caccgtttctaagatggtagaaaggaagaagctatctaataagagaac 124
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gtgcatgacagccaccgtttctaagatggtagaaaggaagaagctatctaataagagaac 298
Query: 125 aacctggatttaaagtatgttagccatatagaagaagagtctgaggtaggataggatgag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 aacctggatttaaagtatgttagccatatagaagaagagtctgaggtaggataggatgag 238
Query: 185 gaggctgaccttcacataaattaagagctaca---------------gttttgttttgtt 229
|||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 237 gaggctgaccttcacataaattaagagctacagttttgttttgttttgttttgttttgtt 178
Query: 230 ttgttttgttttgttttactaaatgtatgactgtcaagtcaagctataatggtaagttat 289
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 ttgttttgttttgttttactaaatgtatgactgtcaagtcaagctataatggtaagttaa 118
Query: 290 acctcacatgctgagtagatatgaagctggaaatggagctactttgcctccatttgcatt 349
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 117 acctcacatgctgagtagatatgaagctggaaatggagctactttgcctccatctgcatt 58
Query: 350 gcacataggcttttactcccacttgtc 376
|||||||||||||||||||||||||||
Sbjct: 57 gcacataggcttttactcccacttgtc 31
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 779
Length adjustment: 9
Effective length of query: 369
Effective length of database: 770
Effective search space: 284130
Effective search space used: 284130
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no327_b08.g1 MSMg01no327_b08.g1 CHROMAT_FILE:
MSMg01no327_b08.g1 PHD_FILE: MSMg01no327_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:55 2005
(343 letters)
>mm_chr11_12666774_12667513
Length = 740
Score = 617 bits (319), Expect = 0.0
Identities = 336/343 (97%), Gaps = 3/343 (0%)
Strand = Plus / Plus
Query: 1 actcaagagccaagtgcatgagctctaccatgcaggagctcaaccactgagtggcagttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actcaagagccaagtgcatgagctctaccatgcaggagctcaaccactgagtggcagttt 260
Query: 61 tagtctccaaagcacctggcaacaacaaagggaggatgctttcttaagcattttagacga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 tagtctccaaagcacctggcaacaacaaagggaggatgctttcttaagcatttcagacga 320
Query: 121 aagaacatcaggttgtggtggtgaggatgctaggcaggcaagataagaatcagagatcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagaacatcaggttgtggtggtgaggatgctaggcaggcaagataagaatcagagatcac 380
Query: 181 cattttactcccccccccaaatgtttatattctgcacttacacctgaataaaggtgattc 240
|||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 381 cattttac---cccccccaaatgtttatattctgcacttacacctaaataaatgtgattc 437
Query: 241 ttgcaagaaaggttatagatctatcattatgttaaaacaatattctatgatgctaatcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ttgcaagaaaggttatagatctatcattatgttaaaacaatattctatgatgctaatcct 497
Query: 301 gagtggggagaaaaacaggttatcagttttttccttacttctt 343
|||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gagtagggagaaaaacaggttatcagttttttccttacttctt 540
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 740
Length adjustment: 9
Effective length of query: 334
Effective length of database: 731
Effective search space: 244154
Effective search space used: 244154
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
