Query= MSMg01no327_g17.b1 MSMg01no327_g17.b1 CHROMAT_FILE:
MSMg01no327_g17.b1 PHD_FILE: MSMg01no327_g17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:19 2005
(223 letters)
>mm_chr11_81666624_81667247
Length = 624
Score = 402 bits (208), Expect = e-117
Identities = 220/224 (98%), Gaps = 1/224 (0%)
Strand = Plus / Minus
Query: 1 aacctggtctccctgctgtcttcc-agaatggtagccagtgcctgagaaacagcatctat 59
|||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 424 aacctggtctccctactgtctcccaagaatggtagccagtgcctgagaaacagcatctat 365
Query: 60 ggttgtcctctgactgtgacacatccgtatgtatacctgcacacatatgtgcacctatac 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ggttgtcctctgactgtgacacatccgtatgtatacctgcacacatatgtgcacctatac 305
Query: 120 ctacatgaacatgcatgtacacacactcagaatggccttctgcttggaatttcagtccat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ctacatgaacatgcatgtacacacactcagaatggccttctgcttggaatttcagtccat 245
Query: 180 ttctcccaggtaaatgctatgtatgtttcttatgcccttttgag 223
||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 244 ttctcccaggtaaatgctatgtaagtttcttatgcccttttgag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 223
Length of database: 624
Length adjustment: 9
Effective length of query: 214
Effective length of database: 615
Effective search space: 131610
Effective search space used: 131610
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no327_g17.g1 MSMg01no327_g17.g1 CHROMAT_FILE:
MSMg01no327_g17.g1 PHD_FILE: MSMg01no327_g17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:19 2005
(341 letters)
>mm_chr11_81483895_81484635
Length = 741
Score = 650 bits (336), Expect = 0.0
Identities = 339/340 (99%)
Strand = Plus / Plus
Query: 1 agagtgaggaggcagcgcacagcttagatgggtgtggctgcctacttagcaatggcttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agagtgaggaggcagcgcacagcttagatgggtgtggctgcctacttagcaatggcttcc 260
Query: 61 ctctcaggaagaagaatcatcaaaggaatgcaaaggcaattttggagacagtaaatcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctctcaggaagaagaatcatcaaaggaatgcaaaggcaattttggagacagtaaatcctt 320
Query: 121 ggttcagattttagcctagatcctcacagtctctagaaactccgtgggcctcagtcagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggttcagattttagcctagatcctcacagtctctagaaactccgtgggcctcagtcagtt 380
Query: 181 tccagtctgttgagggggttggcatagctatttatttatgtctgggaagctcatctaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccagtctgttgagggggttggcatagctatttatttatgtctgggaagctcatctaaaa 440
Query: 241 cctagtgacaatgcagcacaagctggtaagctcactagatggataaaagcatatatacta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctagtgacaatgcagcacaagctggtaagctcactagatggataaaagcatatatacta 500
Query: 301 tcaagcctgaggacctcaatttgatccctaagacctgctt 340
||||||| ||||||||||||||||||||||||||||||||
Sbjct: 501 tcaagcccgaggacctcaatttgatccctaagacctgctt 540
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
