Query= MSMg01no327_k18.b1 MSMg01no327_k18.b1 CHROMAT_FILE:
MSMg01no327_k18.b1 PHD_FILE: MSMg01no327_k18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:37 2005
(368 letters)
>mm_chr11_59098247_59099014
Length = 768
Score = 690 bits (357), Expect = 0.0
Identities = 363/365 (99%)
Strand = Plus / Plus
Query: 4 gaattctaaggagggctacgtggctcttgtgttgttaacggtctcctggaagtttcagcc 63
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctaaggagggctatgtggctcttgtgttgttaacggtctcctggaagtttcagcc 263
Query: 64 ttcagaagggaagggaagtggccagctccctttctcagccttggattctgccactcaccg 123
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttcagaatggaagggaagtggccagctccctttctcagccttggattctgccactcaccg 323
Query: 124 agtccttgctagcaagactggtatgaggacaagccctcaggaagccttttcacgccctga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agtccttgctagcaagactggtatgaggacaagccctcaggaagccttttcacgccctga 383
Query: 184 acctaggtcagcttcctgccagttctctacatcctcggctgcagcctctgaggccaagca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acctaggtcagcttcctgccagttctctacatcctcggctgcagcctctgaggccaagca 443
Query: 244 aaagacaaagcctccttctccagagggagttggagatccaaatggtccttcctgaaccct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aaagacaaagcctccttctccagagggagttggagatccaaatggtccttcctgaaccct 503
Query: 304 ctcagcccaatagcctaattcttcaccttcccagaacaaaggcaaatgcagaaatcccaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ctcagcccaatagcctaattcttcaccttcccagaacaaaggcaaatgcagaaatcccaa 563
Query: 364 aggct 368
|||||
Sbjct: 564 aggct 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no327_k18.g1 MSMg01no327_k18.g1 CHROMAT_FILE:
MSMg01no327_k18.g1 PHD_FILE: MSMg01no327_k18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:37 2005
(344 letters)
>mm_chr11_59262344_59263088
Length = 745
Score = 650 bits (336), Expect = 0.0
Identities = 342/344 (99%), Gaps = 1/344 (0%)
Strand = Plus / Minus
Query: 1 cattcacgtgtaatcactaactctggtattgagccagttttttccaggtatgcatgtgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 cattcacgtgtaatcactaactctggtattgagccagttttttccaggtatgcatgtgtt 311
Query: 61 tatacattttatccctgttaccccctccctctcttccctcttttcctgcattggcagcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tatacattttatccctgttaccccctccctctcttccctcttttcctgcattggcagcat 251
Query: 121 gttatatttggaaacaccattttagatttttt-aaatctcctcctacaattggcctacaa 179
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 250 gttatatttggaaacaccattttagattttttaaaatctcctcctacaattggcctacaa 191
Query: 180 ttcttaaaattcctggacaggttgagctgataaatgccattttgcatgctaatgagtcca 239
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 190 ttcttaaaattcctggacaggttgagttgataaatgccattttgcatgctaatgagtcca 131
Query: 240 acaccatccaacagccagtagggtagattccagatggaatggctcactgaaagacctgag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 acaccatccaacagccagtagggtagattccagatggaatggctcactgaaagacctgag 71
Query: 300 taggatcagagggtggggactttgaacccagccctcagcttcta 343
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 taggatcagagggtggggactttgaacccagccctcagcttcta 27
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 745
Length adjustment: 9
Effective length of query: 335
Effective length of database: 736
Effective search space: 246560
Effective search space used: 246560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
