Query= MSMg01no328_p13.b1 MSMg01no328_p13.b1 CHROMAT_FILE:
MSMg01no328_p13.b1 PHD_FILE: MSMg01no328_p13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:16 2005
(549 letters)
>mm_chr11_84926600_84927548
Length = 949
Score = 1002 bits (518), Expect = 0.0
Identities = 539/552 (97%), Gaps = 12/552 (2%)
Strand = Plus / Minus
Query: 5 gaattcacagagatctccctgcctctgtctcccaagtgctaggattaaagtcatgcacaa 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gaattcacagagatctacctgcctctgtctcccaagtgctaggattaaagtcatgcacaa 659
Query: 65 ctaccaccccaacagtttaactcttcttaatctgacctctgcaatagcactcctgtttta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 ctaccaccccaacagtttaactcttcttaatctgacctctgcaatagcactcctgtttta 599
Query: 125 cagagtaccattatcttttgtacttagatatctaagctgtcatgacaggatttgtaaaag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 cagagtaccattatcttttgtacttagatatctaagctgtcatgacaggatttgtaaaag 539
Query: 185 gaaattacatgagttgtttaggaacctatggaaaaagaaaacccaatccaagtaatgata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 gaaattacatgagttgtttaggaacctatggaaaaagaaaacccaatccaagtaatgata 479
Query: 245 ataatttattaatatgagtatttcctactcatatatatgacatattttcaaaaagtggct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 ataatttattaatatgagtatttcctactcatatatatgacatattttcaaaaagtggct 419
Query: 305 atgacaacaggcttcttataatatagctttgacattcattctctcgtggtccttgaatct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 atgacaacaggcttcttataatatagctttgacattcattctctcgtggtccttgaatct 359
Query: 365 gaacagccccccc-----acttagacatgacactatttttttaaactgtgagtagcagtg 419
|||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gaacag-----ccttgtgacttagacatgacactatttttttaaactgtgagtagcagtg 304
Query: 420 aaatgttgattttatttttatgttcctttcttattttaaaaacttatttttattatttgt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 aaatgttgattttatttttatgttcctttcttattttaaaaacttatttttattatttgt 244
Query: 480 atgtgtatggtgatacacatgtgt--gtgcatctggaggtcagagctggtctccctccac 537
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 243 atgtgtatggtgatacacatgtgtaagtgcatctggaggtcagagctggtctccctccac 184
Query: 538 cttttttgagag 549
||||||||||||
Sbjct: 183 cttttttgagag 172
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space: 506121
Effective search space used: 506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no328_p13.g1 MSMg01no328_p13.g1 CHROMAT_FILE:
MSMg01no328_p13.g1 PHD_FILE: MSMg01no328_p13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:16 2005
(204 letters)
>mm_chr11_84757652_84758255
Length = 604
Score = 383 bits (198), Expect = e-111
Identities = 201/202 (99%)
Strand = Plus / Plus
Query: 1 ttgcctctcccacctaccttatgaattgaagtagaggaaaagtacttggtttccagacag 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 ttgcctctcccacctaccttatgaattgaagtagaggaaaagtacctggtttccagacag 260
Query: 61 acgccgccactccaagctgagcagacacagctatctgccaggcaggtgttaaaagacctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acgccgccactccaagctgagcagacacagctatctgccaggcaggtgttaaaagacctg 320
Query: 121 ggactccctcctgatgtgtttataaaaagataaagagagaggagatgtgttctatggatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggactccctcctgatgtgtttataaaaagataaagagagaggagatgtgttctatggatg 380
Query: 181 tgtgggtgagtgtgggggaagg 202
||||||||||||||||||||||
Sbjct: 381 tgtgggtgagtgtgggggaagg 402
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 204
Length of database: 604
Length adjustment: 8
Effective length of query: 196
Effective length of database: 596
Effective search space: 116816
Effective search space used: 116816
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
