Query= MSMg01no329_a22.b1 MSMg01no329_a22.b1 CHROMAT_FILE:
MSMg01no329_a22.b1 PHD_FILE: MSMg01no329_a22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:23 2005
(299 letters)
>mm_chr11_39356133_39356828
Length = 696
Score = 520 bits (269), Expect = e-152
Identities = 291/299 (97%), Gaps = 3/299 (1%)
Strand = Plus / Minus
Query: 1 gattagaatgcaagtgaattctaaaaaaaaaaaaaaaacagggaaagaaaaataacacag 60
|||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 496 gattagaatgcaagtgaattct--aaaaaaaaaaaaaaca-ggaaagaaaaataacacag 440
Query: 61 taaaagcatatgaaatcatttaagaaaaagaagcccatattctcaaagacaatattatag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 taaaagcatatgaaatcatttaagaaaaagaagcccatattctcaaagacaatattatag 380
Query: 121 tacttagaaaataaatatgaagacagaggtctgtgtacaaaataaaagatatcacacaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tacttagaaaataaatatgaagacagaggtctgtgtacaaaataaaagatatcacacaca 320
Query: 181 atcatctcatgaataaaactcaatatatccttgtggcatgatgagaagatatttaccccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 319 atcatctcatgaataaaactcaatatatccttgtggcatgatgagaagatatttatctct 260
Query: 241 cagtgttaacatacatatcatcttccacttgatatagcatttgcaagcttttatctaat 299
||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 259 cagtgttaacatacataacatcttccacttgatatagtatttgcaagcttttatctaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 299
Length of database: 696
Length adjustment: 9
Effective length of query: 290
Effective length of database: 687
Effective search space: 199230
Effective search space used: 199230
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no329_a22.g1 MSMg01no329_a22.g1 CHROMAT_FILE:
MSMg01no329_a22.g1 PHD_FILE: MSMg01no329_a22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:23 2005
(614 letters)
>mm_chr11_39217568_39218581
Length = 1014
Score = 1110 bits (574), Expect = 0.0
Identities = 604/614 (98%)
Strand = Plus / Plus
Query: 1 acatatcactacattatgaacatttctatttagtgttttatccttatggactttggtcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acatatcactacattatgaacatttctatttagtgttttatccttatggactttggtcag 260
Query: 61 aactaaatcagtgtgacagtaaacatatctgaaattccattttataacttaaagataact 120
|||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 261 aactaaatcagtgtgacagtaaacgtatctgaaattccattttatagcttaaagataact 320
Query: 121 tgaatataatagactgctttctgtcttcagtagtagttgttttgctaaaggggtagattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaatataatagactgctttctgtcttcagtagtagttgttttgctaaaggggtagattc 380
Query: 181 taagactcatgggatttgttaactttttttgtttttattctttgtaaacttggaaaatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taagactcatgggatttgttaactttttttgtttttattctttgtaaacttggaaaatat 440
Query: 241 agtattatttgtaatatatgtagataatagccatctttgccagatatttatttttatcat 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 441 agtattatttgtaatatatgtagataatagccatctttgccaaatatttatttttatcat 500
Query: 301 taatgtaagtattcactgagtgtttattcttgagtttgtataccccactactgacctcgg 360
||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||
Sbjct: 501 taatgtaagtattcactgagtgtttattcttgagtatgtatacaatattactgacctcgg 560
Query: 361 gacactaaatttaatatcattttgatgcttgtttgatactctttcttaaaattaattatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gacactaaatttaatatcattttgatgcttgtttgatactctttcttaaaattaattatt 620
Query: 421 ttcatttatttacaactaaatgttgccttccctcctggtgcacccttccagaattcttca 480
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 621 ttcatttatttacaactaaatgttgccttccttcctggtgcacccttccagaattcttca 680
Query: 481 tcttagttcctcccctttacctctgagaggccaccccactcctgggcatctcctttctct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 681 tcttagttcctcccctttacctctgagaggccaccccactcctgggcatctcccttctct 740
Query: 541 ggggcttcaagtctttacaggactaggtgcacatgctcccagtgttggttcttctgaact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ggggcttcaagtctttacaggactaggtgcacatgctcccagtgttggttcttctgaact 800
Query: 601 tttcaagacaaaca 614
||||||||||||||
Sbjct: 801 tttcaagacaaaca 814
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space: 606416
Effective search space used: 606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
