Query= MSMg01no332_e07.b1 MSMg01no332_e07.b1 CHROMAT_FILE:
MSMg01no332_e07.b1 PHD_FILE: MSMg01no332_e07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:18:32 2005
(582 letters)
>mm_chr11_67153735_67154719
Length = 985
Score = 1027 bits (531), Expect = 0.0
Identities = 570/585 (97%), Gaps = 3/585 (0%)
Strand = Plus / Plus
Query: 1 gtccagnaggnaatagagtctcagcatccgttttactaggacagcctgctagtctaaccc 60
|||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtccagcaggtaatagagtctcagcatccgttttactaggacagcctgctagtctaacca 260
Query: 61 tgtctgcagctgtcttctggttacattcagaaagttgtatgaaactgcttcagcatcaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtctgcagctgtcttctggttacattcagaaagttgtatgaaactgcttcagcatcaag 320
Query: 121 gtggaaattatccttagatctcaggggggacccaaggaatgcaaatgcatgcgtgcacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtggaaattatccttagatctcaggggggacccaaggaatgcaaatgcatgcgtgcacac 380
Query: 181 tcctgctaggggggcaggtaactaggaaatgaaggtgaagcagcctctctctgactcctt 240
|||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 381 tcctgctaggggggcaggcaaccaggaaatgaaggcgaagcagcctctctctgactcctt 440
Query: 241 tgcagctacaaatgctatt---tctctcctctaatgtgtctttgttaaataaagtttctt 297
||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 441 tgcagctacaaatgctattatctctctcctctaatgtgtctttgctaaataaagtttctt 500
Query: 298 tgcccctcctgcctgagacctcccttagatttctcaaattaacacttccatatttctact 357
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 501 tgcccctcctgcctgagacctccctcagatttctcaaattaacacttccatatttctact 560
Query: 358 ctcaacctgagattcagatcagcagcttttaattccaatttcaaatcctataaagggata 417
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 561 ctcaacctgagattcagatcagcagcttttaattccaatttcaaatcctataaggggata 620
Query: 418 ctaattcatccaatctacatcaaggcttctcctctgattggaacttgacaatgcctggag 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctaattcatccaatctacatcaaggcttctcctctgattggaacttgacaatgcctggag 680
Query: 478 tcatgtgctatggccatggctgttaagaagctatgtttttagtggaattgttatcagaga 537
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 681 tcatgtgctatggccatggctgttaagaaactatgtttttagtggaattgttatcagaga 740
Query: 538 aagaataatatctcaaggaagacagatgtcttaaaaatagttaat 582
|||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 741 aagaataatatcacaaggaagacagatgttttaaaaatagttaat 785
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 985
Length adjustment: 10
Effective length of query: 572
Effective length of database: 975
Effective search space: 557700
Effective search space used: 557700
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no332_e07.g1 MSMg01no332_e07.g1 CHROMAT_FILE:
MSMg01no332_e07.g1 PHD_FILE: MSMg01no332_e07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:18:32 2005
(644 letters)
>mm_chr11_67310289_67311332
Length = 1044
Score = 1118 bits (578), Expect = 0.0
Identities = 584/586 (99%)
Strand = Plus / Minus
Query: 59 agaaaatgaacttgtgaaaacagggctgaggaggtagctcggttgctaacgtccttgcct 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1044 agaaaatgaacttgtgaaaacagggctgaggaggtagctcggttgctaacgtccttgcct 985
Query: 119 aacatgcccaaggcactgggttccatcccccgcaaagcacaaaatcatatgtgctggtac 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 984 aacatgcccaaggcactgggttccatcccccgcaaagcacaaaatcatatgtgctggtac 925
Query: 179 acacctgaaatcttaccatgcaggaggtagatgcaggaggatcaaaaatcaatctgtgct 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 acacctgaaatcttaccatgcaggaggtagatgcaggaggatcaaaaatcaatctgtgct 865
Query: 239 acatgatcccctgtctcaaacacacccacacatgaaatactcctctacctttcttctccc 298
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 864 acatgatcccctgtctcaaacacacccacacatgaaatacacctctacctttcttctccc 805
Query: 299 agacctcatctatcccaaattcatgttttattgatctctcccaactgtgtcttacttaga 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 agacctcatctatcccaaattcatgttttattgatctctcccaactgtgtcttacttaga 745
Query: 359 tctcaaaggatcttatattcttgcttatactaatgtgtgataggcaaggttcagctaatg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tctcaaaggatcttatattcttgcttatactaatgtgtgataggcaaggttcagctaatg 685
Query: 419 gccctgacaacagataactagtcttcaaatgaaagctggtgaagccaatgtccttggctc 478
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 684 gccctgacaacagataactagtcttcaaatgaaagctggtgaagccagtgtccttggctc 625
Query: 479 attccctgctgccataggaatccatcagaatcaaggttccccttgggttttcccttctct 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 attccctgctgccataggaatccatcagaatcaaggttccccttgggttttcccttctct 565
Query: 539 ggtgatattttctactcccttcttcattctacccactccccacaacagggccacctttct 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ggtgatattttctactcccttcttcattctacccactccccacaacagggccacctttct 505
Query: 599 tgttcagagacagcctctgcaatgatgttggaggttaaaccctaaa 644
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgttcagagacagcctctgcaatgatgttggaggttaaaccctaaa 459
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space: 655556
Effective search space used: 655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
