Query= MSMg01no333_o16.b1 MSMg01no333_o16.b1 CHROMAT_FILE:
MSMg01no333_o16.b1 PHD_FILE: MSMg01no333_o16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:11 2005
(343 letters)
>mm_chr11_55111126_55111868
Length = 743
Score = 594 bits (307), Expect = e-174
Identities = 334/347 (96%), Gaps = 8/347 (2%)
Strand = Plus / Plus
Query: 1 gctttgaactggctttgattctcttcctaaatagctgggatcacaggtgcggtgccccag 60
|||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 gctttgaactggctttgattttcttcctaaatagctgggatcacaggtttggtgccccag 260
Query: 61 tatttcaaagggaaggagaatttcagagcccatagcatagaaaagcagaatgacctccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatttcaaagggaaggagaatttcagagcccatagcatagaaaagcagaatgacctccaa 320
Query: 121 tctgctaaggaatatgcatcctaccctatgggtgcccttaaggtcagaagagatgcctgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctgctaaggaatatgcatcctaccctatgggtgcccttaaggtcagaagagatgcctgg 380
Query: 181 ttgggtacaggctgctcaggagagaaatagctaggtttgtaacctctactaatttactcc 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 381 ttgggtacaggctgctcaggagagaaatagctaggtttgtaacctctactgatttactcc 440
Query: 241 tctctaga----ttttcgtggaagccttgtagtagggtgatcttggaaaaacgccttagg 296
|||||||| | |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 441 tctctagagcact----gtggaagccttgtagtagggtgatcttggaaaaatgccttagg 496
Query: 297 aagaacacagatctagaagacaaagaaattgtattctggccctgcat 343
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 aagaacacagatctagaagacaaagaaattgtattctggccctgcat 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no333_o16.g1 MSMg01no333_o16.g1 CHROMAT_FILE:
MSMg01no333_o16.g1 PHD_FILE: MSMg01no333_o16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:11 2005
(345 letters)
>mm_chr11_55284069_55284813
Length = 745
Score = 648 bits (335), Expect = 0.0
Identities = 341/343 (99%)
Strand = Plus / Minus
Query: 1 caggccaggaagggctccacagtaagaattttaaaaaaaggcagttgatcatcgatggtt 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 543 caggccaggaagggctccacagtaagaatttttaaaaaaggcagttgatcatcgatggtt 484
Query: 61 cggcaggagacctaatggctgtgcttgccaacaaacccaatcggtgactgtgacccactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 cggcaggagacctaatggctgtgcttgccaacaaacccaatcggtgactgtgacccactg 424
Query: 121 cacaataactggacactggacaccatcctctccccagcaatttcagatgtgacttatttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 cacaataactggacactggacaccatcctctccccagcaatttcagatgtgacttatttt 364
Query: 181 tgtggctctggtgactgaacccggggcttcctgtattccatgccaagtgctccacctctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tgtggctctggtgactgaacccggggcttcctgtattccatgccaagtgctccacctctg 304
Query: 241 cactgaagcccgggccggtcctatccaatttcaaactttaacttcaactcttgtaagaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 cactgaagcccgggccggtcctatccaatttcaaactttaacttcaactcttgtaagaat 244
Query: 301 ttaaacactttgtttccttggacttacgtccttctcaaacaaa 343
|||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 243 ttaaacactttgtttccttggacttacgaccttctcaaacaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
