CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTGATTTTCCATACACTGTTTTTGATTTGTAAAGCTAGGTAGTCA
ATGGCTCCCCAAATGTGTCACACTGGACATTATCCAGATGGAGTGCCAGT
TTTCATTTGTGATTAACGAGGTAAAATCCAACAAGAAAGGTTTTCTACCA
TAGCAAACTGTAGCTCAGCTTATAGCAAATGACAAATCAAAGGAGGCAGC
CTGCCTTGGCCATGCTTTTCAAACAGCAACTTCATTGAACTGTCAGTTAC
CAAATGAGGTGATTAACTCTGTATGCTGATTAAAGTTTTATTCTATGTCC
TTATTATCAACAAGTTTCTATTTTCTTTTCTCTTTGGAGGTGAGTCTAGT
TACTTCAATATAATTCTCACCACCTAAGGCTTTATTACTTCATTTAGGTT
TTGAAATGTGCACTTACCAGTGCTATTTTCAAGGGCTCTCTATCACATGT
TTGTGAAATTAATGTAACCGAGCATTGGATTAAAGGAAGGTAACACACAC
ACACACACATATTCTTTCCAGGTATACACAGACACCAGGGTGAGTCAGTG
TAACTGCTGGCAGGTGTCTGCCTCTCTGTTTGATATGTTGCTGTCATGCC
ATTTCATTTCAAATGCATAGTTAATGTTGTCTTTNTAAAACTGTGCTTTG
TGTTTATACTGACTCCAAATGACTGACAAN

CGATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXACATCCCTTAACCCCAGCTCTTTGATTC
TTAGGAGACTGAATTCATACATTTTTTTTTCTTAACACAGCAAAAGGATT
TAGATATCTATCTGCCTTTGTTAAGCACAGACACTAAACTACTTGGGTGG
GACCCAGCCCTAAAATTACCATTTTTCACCAAGCCTGAGCCTAACCTTTC
TCTGTTCTAGGCTGATCCTGAACTCAAGAATCTATGCCTTTGTAAACATA
AACAAAAAACTTAGCTAGGTTGGATGACTTCAATCACCACTCCCTAAATC
GCTTTTCTTCTTCCTTAGTAATTTTCTAACAAGTTGGCTTGCTGCTTGGC
TGTTTTGTTCTTTTAGATTCCTGATGCCCCTCATAAAAATCACATTTCAT
CCTTACTTTTTGCATAGTTGAGAAATATACTTTTGAGCTCTTGTATTTAG
AGCTCATTCCCATAGATTTAAGGGCTGCCCTAAAAGTCCCAGTGATTACC
ATTTAGCTGAGACATAGCCACACCCTTGTCTTCTGGATCTCTCCTGCTGC
TTCTAATTATCATGGAAACATTAACTTTAAGAGGGAGGACATTCCTCTGA
AGGAAAGTGACAACATCCAGTGGCTATGTACCTAAATATCTATCTTTACA
CTTTATATTATGTTCAAATCAAATT

Query= MSMg01no334_k10.b1 MSMg01no334_k10.b1 CHROMAT_FILE:
MSMg01no334_k10.b1 PHD_FILE: MSMg01no334_k10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:09 2005
         (658 letters)



>mm_chr11_37116919_37117973
          Length = 1055

 Score = 1199 bits (620), Expect = 0.0
 Identities = 645/654 (98%), Gaps = 5/654 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   ttgatttgtaaagctaggtagtcaatggctccccaaatgtgtcacactggacattatcca 64
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 205 ttgatttgtaaagctaggtagtcaatggctccccaaatgtgtcacattggacattatcca 264

                                                                       
Query: 65  gatggagtgccagttttcatttgtgattaacgaggtaaaatccaacaagaaaggttttct 124
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 265 gatggagtgccagttttcatttgcgattaacgaggtaaaatccaacaagaaaggttttct 324

                                                                       
Query: 125 accatagcaaactgtagctcagcttatagcaaatgacaaatcaaaggaggcagcctgcct 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 accatagcaaactgtagctcagcttatagcaaatgacaaatcaaaggaggcagcctgcct 384

                                                                       
Query: 185 tggccatgcttttcaaacagcaacttcattgaactgtcagttaccaaatgaggtgattaa 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tggccatgcttttcaaacagcaacttcattgaactgtcagttaccaaatgaggtgattaa 444

                                                                       
Query: 245 ctctgtatgctgattaaagttttattctatgtccttattatcaacaagtttctattttct 304
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctctg-atgctgattaaagttttattctatgtccttattatcaacaagtttctattttct 503

                                                                       
Query: 305 tttctctttggaggtgagtctagttacttcaatataattctcaccacctaaggctttatt 364
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tttctctttggaggtgggtctagttacttcaatataattctcaccacctaaggctttatt 563

                                                                       
Query: 365 acttcatttaggttttgaaatgtgcacttaccagtgctattttcaagggctctctatcac 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 acttcatttaggttttgaaatgtgcacttaccagtgctattttcaagggctctctatcac 623

                                                                       
Query: 425 atgtttgtgaaattaatgtaaccgagcattggattaaaggaaggtaacacacacacacac 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 atgtttgtgaaattaatgtaaccgagcattggattaaaggaaggtaacacacacacacac 683

                                                                       
Query: 485 acatattctttccaggtatacacagacaccagggtgagtcagtgtaactgctggcaggtg 544
           |  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 684 a--tattctttccaggtatacacagacaccagggtgagtcaatgtaactgctggcaggtg 741

                                                                       
Query: 545 tctgcctctctgtttgatatgttgctgtcatgccatttcatttcaaatgcatagttaatg 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 tctgcctctctgtttgatatgttgctgtcatgccatttcatttcaaatgcatagttaatg 801

                                                                 
Query: 605 ttgtctttntaaaa-ctgtgctttgtgtttatactgactccaaatgactgacaa 657
           |||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 802 ttgtcttt-taaaaactgtgctttgtgtttatactgactccaaatgactgacaa 854


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1055
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1045
Effective search space:   677160
Effective search space used:   677160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)