Query= MSMg01no335_b06.b1 MSMg01no335_b06.b1 CHROMAT_FILE:
MSMg01no335_b06.b1 PHD_FILE: MSMg01no335_b06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:43 2005
(664 letters)
>mm_chr11_68659489_68660552
Length = 1064
Score = 1210 bits (626), Expect = 0.0
Identities = 653/664 (98%), Gaps = 6/664 (0%)
Strand = Plus / Plus
Query: 4 ggaattcacagaggtacc---atctagtcacttgctcttgccatttcaactggctaaaac 60
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcacagagg-a--gggatctagtcacttgctcttgccatttcaactggctaaaac 260
Query: 61 tcccaatcataggacaggtacagacaccaagatgactggcccactctagattcctgccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcccaatcataggacaggtacagacaccaagatgactggcccactctagattcctgccac 320
Query: 121 attcttcctacaacccactctttgctgctcaacttctgttacaacactacatccacacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attcttcctacaacccactctttgctgctcaacttctgttacaacactacatccacacaa 380
Query: 181 caaaagagatacggtaacgtctacagattgtctgtgctgctctattcttagagatgtctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaaagagatacggtaacgtctacagattgtctgtgctgctctattcttagagatgtctt 440
Query: 241 tagagcatgaaagtactttaatatgttaaccacactatgctaggagtcctgctgaagctg 300
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 441 tagagcatgaaagtactttaatatgttaaccacacaaggctaggagtcctgctgaagctg 500
Query: 301 agttctcgggttccaattccaccattaaattacttattcaaactacttactctcttaggg 360
|||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 501 agttctagggttccaattccaccattaaattacttattcaaactgcttactctcttaggg 560
Query: 361 cttcagttgttcatgtttcatctaataaacgtatggactacactgggtgactaaatattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttcagttgttcatgtttcatctaataaacgtatggactacactgggtgactaaatattt 620
Query: 421 caagtatatatactgattaataaatactgatttgttctgtaattctgtcccgttgtcaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caagtatatatactgattaataaatactgatttgttctgtaattctgtcccgttgtcaaa 680
Query: 481 gtcccagaaattgccacttcccttgcccaaatacagaggttactacttgacctatggtag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtcccagaaattgccacttcccttgcccaaatacagaggttactacttgacctatggtag 740
Query: 541 gtagtcaatgggtaagaatgggctcttcaggagccagaagtactcattatttcaaaagac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtagtcaatgggtaagaatgggctcttcaggagccagaagtactcattatttcaaaagac 800
Query: 601 cccaagtgcaggcatcaccctgtggcatccaaactcttccgggttcatactgaagtctcc 660
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 801 cccaagtgcaggcatcaccctgtggcatccaaactcttccgggttcacactgaagtctcc 860
Query: 661 ttag 664
||||
Sbjct: 861 ttag 864
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space: 689316
Effective search space used: 689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no335_b06.g1 MSMg01no335_b06.g1 CHROMAT_FILE:
MSMg01no335_b06.g1 PHD_FILE: MSMg01no335_b06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:43 2005
(394 letters)
>mm_chr11_68828547_68829340
Length = 794
Score = 404 bits (209), Expect = e-117
Identities = 299/355 (84%), Gaps = 43/355 (12%)
Strand = Plus / Minus
Query: 1 atctatgtggcaggcacataggatcggggtatattcattgaagaaaacaaaacaaaaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 atctatgtggcaggcacataggatcggggtatattcattgaagaaaacaaaacaaaaacc 253
Query: 61 ctcttgttctgagacaaggagattgacgggaaaacaggcaaaatatatggagaagaaaga 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ctcttgttctgaggcaaggagattgacgggaaaacaggcaaaatatatggagaagaaaga 193
Query: 121 aagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaaga 180
||||||||||||||||||||||||||| ||| ||| ||| ||| ||| |||
Sbjct: 192 aagaaagaaagaaagaaagaaagaaaggaaggaaggaaggaaggaag---gaa------- 143
Query: 181 aagaaagaaagaaagaaagaaagaaagaaaggaaggaaggaaggaaggaaggaaggaagg 240
||||||||||||||||| ||| ||||||||
Sbjct: 142 ------------------------------ggaaggaaggaaggaagaaagaaaggaagg 113
Query: 241 aaggaaggaaggaaggaaggaagaaaaagcaaagcaaggagattgtctggcattccagtt 300
||| ||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 112 aagaaaggaag-aagaaaggaagaaaaagcaaagcgaggagattgtctggcattccagtt 54
Query: 301 ccaggagacctgacgctacctttgttgttgttgttgttttattttgttttgtttt 355
|||||||||||| ||||||||||||||||||||||||| | |||||||||||||
Sbjct: 53 ccaggagacctggcgctacctttgttgttgttgttgttgt--tttgttttgtttt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 87
Number of extensions: 25
Number of successful extensions: 25
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 1
Length of query: 394
Length of database: 794
Length adjustment: 9
Effective length of query: 385
Effective length of database: 785
Effective search space: 302225
Effective search space used: 302225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
