XXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCGAGGATCCGCGGAATTCCA
TGGTGGTTGCATAGAGAAAAGTACGGAAGCTTCTCTCCTGTAAAACCCTT
GCTTCAGTTCAACTTATACTGTATGACTGCAGTTAGATGGGTTTGTAACG
CCTCTGAATTGTTACATTTATGGCAGAATGAGGTGTGGCCACTTGACTGC
TCTATGTTTTTCTTCATGTATATGGAAGAATATTCTAACAGAATGAGATG
GGTCTTCAGTTACATCGAGAGCAGCATTATTACATCTGTGTTGTGTGTCC
AAGACACATAAGCATTATTACTATGAGTGATATATACATATATATACATA
TATATGTATATATATAATATAACATACATATATATCAGTTTCATCTGTGG
ACTGTGGACTATAGGAACTTCATCACCATTGCTATATTTGTGTAAAGTGT
GTGCTGTAATACATGTACACACCAGAATTATGTCTGTGTGACATGTATAC
TATACTACACACCAATCAGCATTATTGTATCTTATGCAATATAAGGAATG
CCAATTTAGCCTAAGGTCAAAGATAATCACATTCTATTTTTTTTTTCAGA
AACAGTGGCCAGGGGTACAGTATAAAAACAAAATTATCTTCTCACACATT
GGAAGCTTTGGCCCTTCACTGCTCCAGCTCTTGGGTTATTTGCTCTAATT
TCTGCGTTAGAGAAGATTAAAAGCATGTCTTCTAGAAGTTCTATACTCAG
AAAGC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXTTCTGTAAATCCATCAGTGCCTGTACTGTTTAAT
ATGGAAGGCTTTTTCATTATTTCATTATTTCAAACTACTCATTTGTTCTG
AATCTTTTTAGTGTGTTGATCTCTTCTTGGTTTATTCTTCATGATTTGGA
TGAATCTAGAAGTTCATTCATGTCTTTCAGCTTTTCCTGTGGAAAGGAGT
ACAGGCTTTTAAAGTATTCTCATATAGGACGAATTTCTCTGGTGTCTGTT
GTAATGTTTTCTTGCTCATTTCTGGTGCTGTAAGTTTAGGTCCTCTTCAT
ATCTTTTGATTATTAGGGCTATGTTTGTTTTGCTTATCTTCTGAAGGAAC
CAACTCGTAGATTCACTGGCCCTTTGTATTCTTTCTTGGTTTCTGTCTCA
TTGATTTCAGCTCTGTTGTTGATTATGAATTACCACAGAGTGTGTTTGAA
TTTGGTTGGTGCTTATTTTCCCCACATCTTTGAGGTGCATCATTAAGTCA
TATATTCATGCTCATTCTGTTTTTTTCATACGGGGCACTTTACCTATTAA
TTTCCTCACCAGATTGTTTTTGCTGTATACTAGAGGGGAAACTTTAATTT
TTTTCCAAGGCTATTTCCAATGATGGGCTTAAACCGCTTTTACCTCCCTT
TTCCCCCCCCCACCCTAAATTTTGTAAAAAAAAAAAGGGGGTTTTAAAAA
CCTGTTTTCTTGGGAGAAATCCC

Query= MSMg01no337_g19.b1 MSMg01no337_g19.b1 CHROMAT_FILE:
MSMg01no337_g19.b1 PHD_FILE: MSMg01no337_g19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:48 2005
         (634 letters)



>mm_chr11_25637661_25638694
          Length = 1034

 Score = 1064 bits (550), Expect = 0.0
 Identities = 628/690 (91%), Gaps = 56/690 (8%)
 Strand = Plus / Plus

                                                                       
Query: 1   agagaaaagtacggaagcttctctcctgtaaaacccttgcttcagttcaacttatactgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 agagaaaagtacggaagcttctctcctgtaaaacccttgcttcagttcaacttatactgt 204

                                                                       
Query: 61  atgactgcagttagatgggtttgtaacgcctctgaattgttacatttatggcagaatgag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 atgactgcagttagatgggtttgtaacgcctctgaattgttacatttatggcagaatgag 264

                                                                       
Query: 121 gtgtggccacttgactgctctatgtttttcttcatgtatatggaagaatattctaacaga 180
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtgtggccacttgactgctctgtgtttttcttcatgtatatggaagaatattctaacaga 324

                                                                       
Query: 181 atgagatgggtcttcagttacatcgagagcagcattattacatctgtgttgtgtgtccaa 240
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atgagatgggtcttcagtttcatcgagagcagcattattacatctgtgttgtgtgtccaa 384

                                                                       
Query: 241 gacacataagcattattactatgagtg----atatatacatatatatacatatatatg-- 294
           |||||||||||||||||||||||||||    ||||||| ||||||||| |||||||||  
Sbjct: 385 gacacataagcattattactatgagtgatatatatatatatatatatatatatatatgtg 444

                                                                       
Query: 295 --------------------------------------------------tatatatata 304
                                                             ||||||||||
Sbjct: 445 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtatgtatatatatatatatata 504

                                                                       
Query: 305 atataacatacatatatatcagtttcatctgtggactgtggactataggaacttcatcac 364
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atataacatacatatatattagtttcatctgtggactgtggactataggaacttcatcac 564

                                                                       
Query: 365 cattgctatatttgtgtaaagtgtgtgctgtaatacatgtacacaccagaattatgtctg 424
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 565 cattgctatatttgtgtaaagtgtgtgctgtaacacatgtacacaccagaattatgtctg 624

                                                                       
Query: 425 tgtgacatgtatactatactacacaccaatcagcattattgtatcttatgcaatataagg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgtgacatgtatactatactacacaccaatcagcattattgtatcttatgcaatataagg 684

                                                                       
Query: 485 aatgccaatttagcctaaggtcaaagataatcacattctattttttttttcagaaacagt 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aatgccaatttagcctaaggtcaaagataatcacattctattttttttttcagaaacagt 744

                                                                       
Query: 545 ggccaggggtacagtataaaaacaaaattatcttctcacacattggaagctttggccctt 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ggccaggggtacagtataaaaacaaaattatcttctcacacattggaagctttggccctt 804

                                         
Query: 605 cactgctccagctcttgggttatttgctct 634
           ||||||||||||||||||||||||||||||
Sbjct: 805 cactgctccagctcttgggttatttgctct 834


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space:   638976
Effective search space used:   638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)