Query= MSMg01no337_m03.b1 MSMg01no337_m03.b1 CHROMAT_FILE:
MSMg01no337_m03.b1 PHD_FILE: MSMg01no337_m03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:14 2005
(511 letters)
>mm_chr11_65280939_65281849
Length = 911
Score = 667 bits (345), Expect = 0.0
Identities = 360/365 (98%), Gaps = 2/365 (0%)
Strand = Plus / Minus
Query: 5 gaattcttca-atatctcccattcttatgtgggcacccacaattaattcttgactttcta 63
|||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gaattcttcacata-ctaccattcttatgtgggcacccacaattaattcttgactttcta 306
Query: 64 ctgctcctgattttgcctaagaagttagatagcctctttgtgttgacaatagatggcatc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ctgctcctgattttgcctaagaagttagatagcctctttgtgttgacaatagatggcatc 246
Query: 124 cttcatcactttttgctcccttagcataatgtttgccatgttttgggactttggattagg 183
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 245 cttcatcactttttgctcccttagcataatgtttgccatgtttttggactttggattagg 186
Query: 184 aaaccagttgaatgttttaagtggggcttcatgggtcatactagtaggagcatgaaaaac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 aaaccagttgaatgttttaagtggggcttcatgggtcatactagtaggagcatgaaaaac 126
Query: 244 agtggtgctgagtgtgatttgaaaggtgagggcccagttcaagaggtttcaaaggagaag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 agtggtgctgagtgtgatttgaaaggtgagggcccagttcaagaggtttcaaaggagaag 66
Query: 304 aacgttagaatgtggtctagaggctgttcttgtgatattttggcaaaggatgtgaaggta 363
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 aacgttagtatgtggtctagaggctgttcttgtgatattttggcaaaggatgtgaaggta 6
Query: 364 aagcc 368
|||||
Sbjct: 5 aagcc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no337_m03.g1 MSMg01no337_m03.g1 CHROMAT_FILE:
MSMg01no337_m03.g1 PHD_FILE: MSMg01no337_m03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:14 2005
(441 letters)
>mm_chr11_65112990_65113830
Length = 841
Score = 760 bits (393), Expect = 0.0
Identities = 426/437 (97%)
Strand = Plus / Plus
Query: 1 tgggaaactggcagctttggaagatgcaacaaggctctctcttgtcactatcagcgagac 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgggaaactggcagttttggaagatgcaacaaggctctctcttgtcactatcagcgagac 260
Query: 61 aggctgttggcattttcctaaaatagacaccccatgccttttgcttagctaaaagggaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggctgttggcattttcctaaaatagacaccccatgccttttgcttagctaaaagggaat 320
Query: 121 tgctccattccctagctctgggccgtaatacgtacttggtgggttgtgtttgacttctgt 180
|| |||||||||||||||||| ||||||| | |||||| |||||||||||||||||||||
Sbjct: 321 tgttccattccctagctctggaccgtaatgcatacttgatgggttgtgtttgacttctgt 380
Query: 181 gaatccttcctgaaaagcagggaactgtcttattcccctatattggccactccatgcttg 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 381 gaatccttcctgaaaagcagggaactgtcttattcccctatactggccactccatgcttg 440
Query: 241 tgggttctgtatctaaaaattcaagcaaccatgcagcaaaaacatttggaaaaaaagtta 300
||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 441 tgggttctgcatccaaaaattcaagcaaccatgcagcaaaaacatttggaaaaaaaatta 500
Query: 301 tatggcttgtgactaagcatggtggtatcatggtactcagagaatgggtgcagagtgact 360
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatggcttgtgactaagcgtggtggtatcatggtactcagagaatgggtgcagagtgact 560
Query: 361 gcttgaagttagaggccagcctggtagacaaaggaatttctaggttatctaaggttaaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcttgaagttagaggccagcctggtagacaaaggaatttctaggttatctaaggttaaag 620
Query: 421 agtaagacactagcacg 437
|||||||||||||||||
Sbjct: 621 agtaagacactagcacg 637
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space: 359424
Effective search space used: 359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
