Query= MSMg01no338_e07.b1 MSMg01no338_e07.b1 CHROMAT_FILE:
MSMg01no338_e07.b1 PHD_FILE: MSMg01no338_e07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:52 2005
(551 letters)
>mm_chr11_98677881_98678831
Length = 951
Score = 1025 bits (530), Expect = 0.0
Identities = 546/552 (98%), Gaps = 2/552 (0%)
Strand = Plus / Plus
Query: 1 atctcattcataatagaattgctggccagatttgtcttgtttctctttttctttagaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atctcattcataatagaattgctggccagatttgtcttgtttctctttttctttagaaaa 260
Query: 61 agcagcttcttactgctgtctctaaataaggaagtgccctgtatcatcatatactattga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcagcttcttactgctgtctctaaataaggaagtgccctgtatcatcatatactattga 320
Query: 121 agtctgtagaaaaaggaagcaagcttaaggctggtaacacttgaagaaaaacagaagtag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtctgtagaaaaaggaagcaagcttaaggctggtaacacttgaagaaaaacagaagtag 380
Query: 181 agtcagtccagaatggaagtgtctggaggctagaaaagggcatagagtccgtggagctaa 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 381 agtcagtccagaatggaagtgtctggaggctagaaaagggcatagtgtccgtggagctaa 440
Query: 241 agtcacagatgngt-angagccaccaaagtgggggccaagaactctaggctgaactagag 299
||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtcacagatg-gtcatgagccaccaaagtgggggccaagaactctaggctgaactagag 499
Query: 300 ctctctccacctaggctctgcctgagcagtatataggcatgcaagtcttctttcacagag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctctctccacctaggctctgcctgagcagtatataggcatgcaagtcttctttcacagag 559
Query: 360 ctgcagatggagccagacttcatgtttacacctccatagccatgactttctcaagagact 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ctgcagatggagccagacttcatgtttacacctccatagccatgactttctcaagagact 619
Query: 420 tgtgggcactgactgagaatacagattctagagtacttggtctggctgtgagttagtcag 479
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tgtgggcactgactgagaacacagattctagagtacttggtctggctgtgagttagtcag 679
Query: 480 acctgttgaagaanatgtgctttattctctagtgtattagtaatgaacacattctttaag 539
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 acctgttgaagaaaatgtgctttattctctagtgtattagtaatgaacacattctttaag 739
Query: 540 atatggggctgg 551
||||||||||||
Sbjct: 740 atatggggctgg 751
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space: 509081
Effective search space used: 509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no338_e07.g1 MSMg01no338_e07.g1 CHROMAT_FILE:
MSMg01no338_e07.g1 PHD_FILE: MSMg01no338_e07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:52 2005
(516 letters)
>mm_chr11_98863763_98864678
Length = 916
Score = 897 bits (464), Expect = 0.0
Identities = 467/468 (99%)
Strand = Plus / Minus
Query: 49 ctgcagagctgactcaacagttaagagcacgtatacttgtacattggatctatgttcagt 108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 916 ctgcagagctgactcaacagttaagagcacgtatacttgtacattggatctatgttcagt 857
Query: 109 tttcggcacccacatggcagttcacaactgtctcactcagttgagattcaaggtgtcttc 168
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 856 tttcggcacccacatggcagttcacaactgtctcactcagttgagagtcaaggtgtcttc 797
Query: 169 ttctggcctccatgggctagtgctacgcgcacatgaggcacatatatacatgcaggcaaa 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 ttctggcctccatgggctagtgctacgcgcacatgaggcacatatatacatgcaggcaaa 737
Query: 229 catccagatacataaaataattttcaaatatcaattttaaagggtatatcaggcagcttt 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 catccagatacataaaataattttcaaatatcaattttaaagggtatatcaggcagcttt 677
Query: 289 tataagggttacccaattgactgatcatagcttaaatgttgcttttcttttccaggtgct 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 tataagggttacccaattgactgatcatagcttaaatgttgcttttcttttccaggtgct 617
Query: 349 ttttgaccatgtaggttgcttaaagaaatatgacactgtgttggatattctaagagactt 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 ttttgaccatgtaggttgcttaaagaaatatgacactgtgttggatattctaagagactt 557
Query: 409 ctttgagctcaggcttaaatattatggattaagaaaagaatggcttctaggaatgcttgg 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ctttgagctcaggcttaaatattatggattaagaaaagaatggcttctaggaatgcttgg 497
Query: 469 tgcagaatcttctaaactgaataatcaagctcgctttatattagagaa 516
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tgcagaatcttctaaactgaataatcaagctcgctttatattagagaa 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 916
Length adjustment: 10
Effective length of query: 506
Effective length of database: 906
Effective search space: 458436
Effective search space used: 458436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
